RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
LITAF-201ENST00000339430 NXNQ6DKJ4 435 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 TFAP2DQ7Z6R9 452 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 STYXQ8WUJ0 223 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 MRGPRX2Q96LB1 330 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 POMPQ9Y244 141 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 LAMA2P24043 3122 aaKnown RBP16.46■□□□□ 0.23
LITAF-201ENST00000339430 TNFRSF10BO14763 440 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 HDAC3O15379 428 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 FGF10O15520 208 aaPredicted RBP16.46■□□□□ 0.23
LITAF-201ENST00000339430 DLX3O60479 287 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 SYN1P17600 705 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 TFEBP19484 476 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 DNAJB2P25686 324 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 ADRA1AP35348 466 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 GPR15P49685 360 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 MAXP61244 160 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 FPGSQ05932 587 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 PDCD2Q16342 344 aaPredicted RBP16.46■□□□□ 0.23
LITAF-201ENST00000339430 TMEM198Q66K66 360 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 RNF111Q6ZNA4 994 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 KLHDC8BQ8IXV7 354 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 RC3H2Q9HBD1 1191 aaKnown RBP16.46■□□□□ 0.23
LITAF-201ENST00000339430 VWA8A3KMH1 1905 aa16.46■□□□□ 0.23
LITAF-201ENST00000339430 TTC24A2A3L6 582 aaPredicted RBP16.45■□□□□ 0.22
LITAF-201ENST00000339430 TMEM233B4DJY2 109 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 GRID2O43424 1007 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 FGFR3P22607 806 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 TAS2R39P59534 338 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 DSG1Q02413 1049 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 ASPHQ12797 758 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 PPIGQ13427 754 aaKnown RBP eCLIP16.45■□□□□ 0.22
LITAF-201ENST00000339430 BTG3Q14201 252 aaPredicted RBP16.45■□□□□ 0.22
LITAF-201ENST00000339430 UGP2Q16851 508 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 EML3Q32P44 896 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 TAS1R1Q7RTX1 841 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 SNX32Q86XE0 403 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 SCML4Q8N228 414 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 RDH11Q8TC12 318 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 CATSPER2Q96P56 530 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 NDNQ99608 321 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 TRIM62Q9BVG3 475 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 IPO11Q9UI26 975 aaKnown RBP16.45■□□□□ 0.22
LITAF-201ENST00000339430 FGBP02675 491 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 PIK3R1P27986 724 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 HOXC13P31276 330 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 NUDT2P50583 147 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 ITKQ08881 620 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 MAPRE1Q15691 268 aaKnown RBP16.45■□□□□ 0.22
LITAF-201ENST00000339430 DDR2Q16832 855 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 CTXN3Q4LDR2 81 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 TSTD2Q5T7W7 516 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 LPCAT4Q643R3 524 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 CNTN4Q8IWV2 1026 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 LZTR1Q8N653 840 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 ECSITQ9BQ95 431 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 YIPF3Q9GZM5 350 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 ENTPD7Q9NQZ7 604 aa16.45■□□□□ 0.22
LITAF-201ENST00000339430 NEMP2A6NFY4 417 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 TARM1B6A8C7 271 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 UBTFL6P0CB48 400 aaPredicted RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 BTKQ06187 659 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 CDC16Q13042 620 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 ZNF789Q5FWF6 425 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 RBM20Q5T481 1227 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 PIK3R6Q5UE93 754 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 METTL21CQ5VZV1 264 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 POTEHQ6S545 545 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 FBXW8Q8N3Y1 598 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 RTL3Q8N8U3 475 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 GPR78Q96P69 363 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 KLHL5Q96PQ7 755 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 ZCWPW1Q9H0M4 648 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 NT5MQ9NPB1 228 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 FIS1Q9Y3D6 152 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 BUD23O43709 281 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 KIF1CO43896 1103 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 SP100P23497 879 aaPredicted RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 CD151P48509 253 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 WNT3AP56704 352 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 PRKAA1Q13131 559 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 TIGD7Q6NT04 549 aaPredicted RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 AAGABQ6PD74 315 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 RANBP10Q6VN20 620 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 DHDDSQ86SQ9 333 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 ZNF354CQ86Y25 554 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 HEXDCQ8WVB3 486 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 IGSF21Q96ID5 467 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 YME1L1Q96TA2 773 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 RTKNQ9BST9 563 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 TREX1Q9NSU2 369 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms