RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC7A1P30825 629 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OVGP1Q12889 678 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NME3Q13232 169 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PPP2R5DQ14738 602 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PDZK1Q5T2W1 519 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CENPPQ6IPU0 288 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 COMMD7Q86VX2 200 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZSWIM9Q86XI8 627 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KRT73Q86Y46 540 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CDKL3Q8IVW4 592 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CLRN3Q8NCR9 226 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OR7D4Q8NG98 312 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FCGR1BQ92637 280 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C7orf34Q96L11 122 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 GLT1D1Q96MS3 346 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 UHRF1Q96T88 793 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 GSDMCQ9BYG8 508 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NYXQ9GZU5 481 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NARFLQ9H6Q4 476 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ACSS3Q9H6R3 686 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SLCO1B3Q9NPD5 702 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PAK6Q9NQU5 681 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NDUFAF4Q9P032 175 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MARK1Q9P0L2 795 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CYTH4Q9UIA0 394 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PCDHB3Q9Y5E6 796 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 HRH3Q9Y5N1 445 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FPGT-TNNI3KV9GXZ4 949 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 UTYO14607 1347 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PRSS51A0A1B0GVH4 220 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 STX16O14662 325 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PPEF1O14829 653 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AIM2O14862 343 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PLEKP08567 350 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DHRS4L1P0CG22 281 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SOX11P35716 441 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AP1S1P61966 158 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FRG1Q14331 258 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM132BQ14DG7 1078 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RFX4Q33E94 735 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 UGT3A2Q3SY77 523 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TAF2Q6P1X5 1199 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF517Q6ZMY9 492 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF438Q7Z4V0 828 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 THAP5Q7Z6K1 395 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PRELID2Q8N945 189 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MCFD2Q8NI22 146 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TFAP2CQ92754 450 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TSGA13Q96PP4 275 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PLIN2Q99541 437 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C11orf49Q9H6J7 331 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ARHGEF4Q9NR80 690 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ABCD2Q9UBJ2 740 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 GGA1Q9UJY5 639 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PRR12Q9ULL5 1215 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ABCA8O94911 1581 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MYO5CQ9NQX4 1742 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PRG4Q92954 1404 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TRIM49BA6NDI0 452 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AQP12BA6NM10 295 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KPNA7A9QM74 516 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 H0YCG3 227 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TBX3O15119 743 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CAPN5O15484 640 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SRP72O76094 671 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CKMT2P17540 419 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TNNI3P19429 210 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MSH3P20585 1137 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 GUCY1A2P33402 732 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RPA3P35244 121 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OPRL1P41146 370 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CD81P60033 236 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KCNC3Q14003 757 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SMCO1Q147U7 214 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MFSD13AQ14CX5 517 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CCNG2Q16589 344 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NOMO2Q5JPE7 1267 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PAGE2BQ5JRK9 111 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ARHGAP17Q68EM7 881 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MZT2BQ6NZ67 158 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RHBDF2Q6PJF5 856 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ADGRD1Q6QNK2 874 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C5orf46Q6UWT4 87 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DPH6Q7L8W6 267 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KSR1Q8IVT5 923 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AQP12AQ8IXF9 295 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ST8SIA4Q92187 359 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 HTRA1Q92743 480 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RORBQ92753 470 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 GTF2H4Q92759 462 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ASB9Q96DX5 294 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 APOL2Q9BQE5 337 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SAV1Q9H4B6 383 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SNX15Q9NRS6 342 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TBC1D22BQ9NU19 505 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OLAHQ9NV23 265 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FAM86C1Q9NVL1 165 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 BFARQ9NZS9 450 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TPRKBQ9Y3C4 175 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AP1M2Q9Y6Q5 423 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms