RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 RASGRP1O95267 797 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 CYP11B1P15538 503 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 MTIF2P46199 727 aaKnown RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 ATP11AP98196 1134 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 RAD51Q06609 339 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 SRSF6Q13247 344 aaKnown RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 TCEA2Q15560 299 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 ALG11Q2TAA5 492 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 C2CD6Q53TS8 623 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 IRF2BP1Q8IU81 584 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 TSACCQ96A04 125 aaPredicted RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 LRRN3Q9H3W5 708 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 METTL5Q9NRN9 209 aaKnown RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 DKK3Q9UBP4 350 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 PISDQ9UG56 409 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 LOXL2Q9Y4K0 774 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-202ENST00000338325 NVLO15381 856 aaKnown RBP11.61□□□□□ -0.55
CSMD2-202ENST00000338325 KDELR3O43731 214 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TMCC1O94876 653 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 IGSF6O95976 241 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TIMP2P16035 220 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 ITIH2P19823 946 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 NFKB2Q00653 900 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 NFATC4Q14934 902 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 LRRC14Q15048 493 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 CDO1Q16878 200 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM52BQ4KMG9 183 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 MANEAQ5SRI9 462 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TAF3Q5VWG9 929 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 ENPP7Q6UWV6 458 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 ATG14Q6ZNE5 492 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 CCNJLQ8IV13 435 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 EMC1Q8N766 993 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 ATL2Q8NHH9 583 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TBC1D31Q96DN5 1066 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 TTYH3Q9C0H2 523 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 SEPT10Q9P0V9 454 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 KLQ9UEF7 1012 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 NEU3Q9UQ49 428 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 COQ6Q9Y2Z9 468 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 AHCTF1Q8WYP5 2266 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 SPTA1P02549 2419 aa11.61□□□□□ -0.55
CSMD2-202ENST00000338325 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 BUB1O43683 1085 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 SFTPCP11686 197 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ITGB6P18564 788 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 XPAP23025 273 aaPredicted RBP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 HTR1BP28222 390 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ADRA1BP35368 520 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 SUOXP51687 545 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 SRP54P61011 504 aaKnown RBP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 NOMO3P69849 1222 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ELP6Q0PNE2 266 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 MAN2A1Q16706 1144 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 WSCD2Q2TBF2 565 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 RAB6CQ53S08 254 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 RD3Q7Z3Z2 195 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ZNF354CQ86Y25 554 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 GPR156Q8NFN8 814 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM159Q96B96 161 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 APOOQ9BUR5 198 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 RAB6CQ9H0N0 254 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 MFHAS1Q9Y4C4 1052 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 PRAMEF10O60809 474 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 LRIG2O94898 1065 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 TNFP01375 233 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 FAM87AP0C7U9 286 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ITIH1P19827 911 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 RHOAP61586 193 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 NAA35Q5VZE5 725 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 NOP9Q86U38 636 aaKnown RBP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 VASH2Q86V25 355 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 Q8N9G6 341 aaPredicted RBP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 ZSCAN1Q8NBB4 408 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 WDR92Q96MX6 357 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 RBM15Q96T37 977 aaKnown RBP eCLIP11.6□□□□□ -0.55
CSMD2-202ENST00000338325 NCAPGQ9BPX3 1015 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 APPL1Q9UKG1 709 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 OR1A2Q9Y585 309 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 FHOD1Q9Y613 1164 aa11.6□□□□□ -0.55
CSMD2-202ENST00000338325 TSPAN11A1L157 253 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 SUV39H1O43463 412 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 MMEP08473 750 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 PLEKP08567 350 aaPredicted RBP11.59□□□□□ -0.55
CSMD2-202ENST00000338325 PNLIPP16233 465 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms