RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 GPC4O75487 556 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 LTA4HP09960 611 aaKnown RBP21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 CHRNA4P43681 627 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 SCNN1GP51170 649 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 MANEALQ5VSG8 457 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 ARMC3Q5W041 872 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 PCDH20Q8N6Y1 951 aaKnown RBP21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 TMEM102Q8N9M5 508 aaPredicted RBP21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 ZNF696Q9H7X3 374 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 CYP4F12Q9HCS2 524 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 GIT1Q9Y2X7 761 aa21.66■■□□□ 1.06
PTDSS1-201ENST00000337004 PSMD12O00232 456 aaPredicted RBP21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 TFAP2AP05549 437 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 FAM58BPP0C7Q3 252 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 CLCN5P51795 746 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 MRPS6P82932 125 aaKnown RBP21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 FASTKQ14296 549 aaKnown RBP21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 SLC5A9Q2M3M2 681 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 RBM20Q5T481 1227 aaKnown RBP21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 CUZD1Q86UP6 607 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 SCAMP5Q8TAC9 235 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 NDNQ99608 321 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 PAAF1Q9BRP4 392 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 A8MT66 165 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 AURKAO14965 403 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 RNASEH2AO75792 299 aaKnown RBP21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 OR6B1O95007 311 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 WNT3AP56704 352 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 ACAP2Q15057 778 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 C6orf52Q5T4I8 152 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 SLC22A9Q8IVM8 553 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 NDFIP2Q9NV92 336 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 AP4S1Q9Y587 144 aa21.65■■□□□ 1.06
PTDSS1-201ENST00000337004 ZNF236Q9UL36 1845 aa21.64■■□□□ 1.06
PTDSS1-201ENST00000337004 E7ENX8 843 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 CCDC166P0CW27 439 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 LEPRP48357 1165 aaKnown RBP21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 GALNT1Q10472 559 aaPredicted RBP21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 PCSK7Q16549 785 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 ZNF280DQ6N043 979 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 EME1Q96AY2 570 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 OLFM1Q99784 485 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 CACNA2D2Q9NY47 1150 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 SFMBT1Q9UHJ3 866 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 APPL1Q9UKG1 709 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 SARDHQ9UL12 918 aa21.64■■□□□ 1.05
PTDSS1-201ENST00000337004 B3GAT3O94766 335 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 MYCNP04198 464 aaPredicted RBP21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 HOXC8P31273 242 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 INHBEP58166 350 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 LRP8Q14114 963 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 AGKQ53H12 422 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 IL23RQ5VWK5 629 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 NMD3Q96D46 503 aaKnown RBP21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 ARNT2Q9HBZ2 717 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 TMLHEQ9NVH6 421 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 ETAA1Q9NY74 926 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 HACD3Q9P035 362 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 IPO11Q9UI26 975 aaKnown RBP21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 C8BP07358 591 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 KCNA5P22460 613 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 C1QTNF8P60827 252 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 MYBPC1Q00872 1141 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 TRAP1Q12931 704 aaKnown RBP21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 MAP2K5Q13163 448 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 AFMIDQ63HM1 303 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 REP15Q6BDI9 236 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 RTL3Q8N8U3 475 aaKnown RBP21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 ATP6V1E2Q96A05 226 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 SLC25A51Q9H1U9 297 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 SMOC2Q9H3U7 446 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 SPAG4Q9NPE6 437 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 CCDC167Q9P0B6 97 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 PCDHGB4Q9UN71 923 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 PCDHGB5Q9Y5G0 923 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 TRPV2Q9Y5S1 764 aa21.63■■□□□ 1.05
PTDSS1-201ENST00000337004 ANKRD33BA6NCL7 494 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 SNRPB2P08579 225 aaKnown RBP21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 CDKL1Q00532 357 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 RHDQ02161 417 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 MAPRE1Q15691 268 aaKnown RBP21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 ZNF789Q5FWF6 425 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 IYDQ6PHW0 289 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 AGMOQ6ZNB7 445 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 RBM44Q6ZP01 1051 aaKnown RBP21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 RIN3Q8TB24 985 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 DDI1Q8WTU0 396 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 DTNBP1Q96EV8 351 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 FLRT1Q9NZU1 646 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 DSEQ9UL01 958 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 E9PAM4 449 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 H0YJX3 145 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 MSI1O43347 362 aaKnown RBP21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 SERPINH1P50454 418 aaKnown RBP21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 INHBCP55103 352 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 SLC14A2Q15849 920 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 PAOXQ6QHF9 649 aa21.62■■□□□ 1.05
PTDSS1-201ENST00000337004 PHF21BQ96EK2 531 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms