RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 MASP1P48740 699 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 PTGES3Q15185 160 aaKnown RBP7.4□□□□□ -1.23
EPHA3-201ENST00000336596 LRRC55Q6ZSA7 311 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 FAM220AQ7Z4H9 259 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 SLC26A11Q86WA9 606 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 ULK2Q8IYT8 1036 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 RFWD2Q8NHY2 731 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 ACTRT2Q8TDY3 377 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 ANKRD49Q8WVL7 239 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 ATP6V1G3Q96LB4 118 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 B3GAT2Q9NPZ5 323 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 IMPAD1Q9NX62 359 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 KCNE2Q9Y6J6 123 aa7.4□□□□□ -1.23
EPHA3-201ENST00000336596 YKT6O15498 198 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 HBQ1P09105 142 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 THRAP10827 490 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ENO3P13929 434 aaPredicted RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 PRLRP16471 622 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TACR2P21452 398 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SERPINB1P30740 379 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 VSNL1P62760 191 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 KCNMA1Q12791 1236 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SNTA1Q13424 505 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CYTH1Q15438 398 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CYP2U1Q7Z449 544 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 OR52L1Q8NGH7 329 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SMYD3Q9H7B4 428 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CDH7Q9ULB5 785 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 LZTS1Q9Y250 596 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CHURC1-FNTBB4DL54 471 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 APOC4-APOC2K7ER74 178 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TIPRLO75663 272 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 APOC2P02655 101 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SOD2P04179 222 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 MAGEA9P43362 315 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NEK3P51956 506 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 BTKQ06187 659 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 DUSP4Q13115 394 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NCF4Q15080 339 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ELOCQ15369 112 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 KBTBD6Q86V97 674 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SETD7Q8WTS6 366 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ZBTB10Q96DT7 871 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NECTIN3Q9NQS3 549 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 PITPNM1O00562 1244 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CD3EAPO15446 510 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TGFB1I1O43294 461 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 AP5Z1O43299 807 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ECDO95905 644 aaPredicted RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NRIP1P48552 1158 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 VEGFBP49765 207 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 LGALS3BPQ08380 585 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 FGL2Q14314 439 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NATD1Q8N6N6 113 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 EFCAB3Q8N7B9 438 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ZNF599Q96NL3 588 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 GTPBP2Q9BX10 602 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 FBXL5Q9UKA1 691 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 A0A0B4J269 797 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 C1orf232A0A0U1RR37 186 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 F8VP50 259 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ADAMTS3O15072 1205 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TSPAN1O60635 241 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CNOT3O75175 753 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CPSF4O95639 269 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SLC35G6P0C7Q6 338 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 JMJD7P0C870 316 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ACRP10323 421 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CLCN6P51797 869 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NRG3P56975 720 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 FAM187BQ17R55 369 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 VPS26BQ4G0F5 336 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TMEM259Q4ZIN3 620 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ZC3H12AQ5D1E8 599 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 RASGRP3Q8IV61 690 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 SPATA4Q8NEY3 305 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 FAM120BQ96EK7 910 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ZFYVE1Q9HBF4 777 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ARHGAP20Q9P2F6 1191 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TFR2Q9UP52 801 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 COG5Q9UP83 839 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 DDX60Q8IY21 1712 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 NAV1Q8NEY1 1877 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 ARL5CA6NH57 179 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CHADO15335 359 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TLX3O43711 291 aaPredicted RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 BMP6P22004 513 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CCND1P24385 295 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 IRF8Q02556 426 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 CACNG1Q06432 222 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 KYNUQ16719 465 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
EPHA3-201ENST00000336596 KCTD16Q68DU8 428 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 TMEM192Q8IY95 271 aa7.39□□□□□ -1.23
EPHA3-201ENST00000336596 KATNAL2Q8IYT4 538 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms