RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 SRLQ86TD4 932 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 PAF1Q8N7H5 531 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 ZNF548Q8NEK5 533 aaPredicted RBP17.92■□□□□ 0.46
CMTM1-204ENST00000336328 ATL2Q8NHH9 583 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 LMX1AQ8TE12 382 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 HNRNPLLQ8WVV9 542 aaKnown RBP17.92■□□□□ 0.46
CMTM1-204ENST00000336328 SYN2Q92777 582 aaPredicted RBP17.92■□□□□ 0.46
CMTM1-204ENST00000336328 ZNF653Q96CK0 615 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 CELF6Q96J87 481 aaKnown RBP17.92■□□□□ 0.46
CMTM1-204ENST00000336328 ISCUQ9H1K1 167 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 SP110Q9HB58 689 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 GPATCH2LQ9NWQ4 482 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 GGT7Q9UJ14 662 aa17.92■□□□□ 0.46
CMTM1-204ENST00000336328 DSPP15924 2871 aaKnown RBP17.92■□□□□ 0.46
CMTM1-204ENST00000336328 TSPAN11A1L157 253 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 J3KR12 359 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 DDX3XO00571 662 aaKnown RBP eCLIP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 RRP8O43159 456 aaKnown RBP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 OPA1O60313 960 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 ACTN2P35609 894 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 EIF4A3P38919 411 aaKnown RBP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 ARL4AP40617 200 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 PPARDQ03181 441 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 IL10RBQ08334 325 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 IQCB1Q15051 598 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 COL28A1Q2UY09 1125 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 FAXCQ5TGI0 409 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 SDR16C5Q8N3Y7 309 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 SCG3Q8WXD2 468 aaKnown RBP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 VOPP1Q96AW1 172 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 GRAMD1AQ96CP6 724 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 DEPDC7Q96QD5 511 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 CINPQ9BW66 212 aaPredicted RBP17.91■□□□□ 0.46
CMTM1-204ENST00000336328 PDFQ9HBH1 243 aa17.91■□□□□ 0.46
CMTM1-204ENST00000336328 A0A1W2PQ67 120 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 A0A1W2PQJ5 194 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 H3BRJ5 948 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 DFFAO00273 331 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 INSIG1O15503 277 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 SPINT1O43278 529 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 ATMINO43313 823 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 LZTS3O60299 673 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 ANXA6P08133 673 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 SKILP12757 684 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 NFKBIAP25963 317 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 SEMG2Q02383 582 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 BCL2L1Q07817 233 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 EIF2B5Q13144 721 aaKnown RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 AGERQ15109 404 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 CA9Q16790 459 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 AFMIDQ63HM1 303 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 MACC1Q6ZN28 852 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 LSMEM2Q8N112 164 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 BBS5Q8N3I7 341 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 ARFGAP1Q8N6T3 406 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 NETO2Q8NC67 525 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 EXOC2Q96KP1 924 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 ZNF599Q96NL3 588 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 KCTD15Q96SI1 283 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 WRAP53Q9BUR4 548 aaKnown RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 MYO1AQ9UBC5 1043 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 APOBEC3BQ9UH17 382 aaKnown RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 RALYQ9UKM9 306 aaKnown RBP17.9■□□□□ 0.46
CMTM1-204ENST00000336328 SPEGQ15772 3267 aa17.9■□□□□ 0.46
CMTM1-204ENST00000336328 ASXL3Q9C0F0 2248 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 LMO7DNF2Z398 122 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 LRCH4O75427 683 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 NEBLO76041 1014 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 PIGNO95427 931 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 IGFALSP35858 605 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 HSPA9P38646 679 aaKnown RBP17.89■□□□□ 0.45
CMTM1-204ENST00000336328 UBASH3AP57075 661 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 ELOCQ15369 112 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 PRRT3Q5FWE3 981 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 LVRNQ6Q4G3 990 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 KDM7AQ6ZMT4 941 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 PHACTR4Q8IZ21 702 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 FSTL5Q8N475 847 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-204ENST00000336328 TP53I13Q8NBR0 393 aaPredicted RBP17.89■□□□□ 0.45
CMTM1-204ENST00000336328 WDR48Q8TAF3 677 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 MAPK15Q8TD08 544 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 FGF11Q92914 225 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 PCDH12Q9NPG4 1184 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 CWC15Q9P013 229 aaKnown RBP17.89■□□□□ 0.45
CMTM1-204ENST00000336328 KLF15Q9UIH9 416 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 DOLKQ9UPQ8 538 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.45
CMTM1-204ENST00000336328 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.88■□□□□ 0.45
CMTM1-204ENST00000336328 CPED1A4D0V7 1026 aa17.88■□□□□ 0.45
CMTM1-204ENST00000336328 EME2A4GXA9 379 aaPredicted RBP17.88■□□□□ 0.45
CMTM1-204ENST00000336328 BUB1BO60566 1050 aaPredicted RBP17.88■□□□□ 0.45
CMTM1-204ENST00000336328 ALPIP09923 528 aa17.88■□□□□ 0.45
CMTM1-204ENST00000336328 CTSEP14091 401 aa17.88■□□□□ 0.45
CMTM1-204ENST00000336328 ITIH2P19823 946 aa17.88■□□□□ 0.45
CMTM1-204ENST00000336328 PTMSP20962 102 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms