RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NDNQ99608 321 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 SEMA3CQ99985 751 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 SEZ6LQ9BYH1 1024 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 UNKQ9C0B0 810 aaKnown RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 POLR1EQ9GZS1 481 aaKnown RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 MRPL46Q9H2W6 279 aaKnown RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 LOC285095A0A1B0GVY8 99 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 GJB3O75712 270 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 PIGNO95427 931 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 CCR10P46092 362 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 LEPRP48357 1165 aaKnown RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 ARL13AQ5H913 290 aaPredicted RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 TMC7Q7Z402 723 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 CFAP52Q8N1V2 620 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 POU5F2Q8N7G0 328 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 THTPAQ9BU02 230 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 MATN2O00339 956 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 MUSKO15146 869 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 LINGO3P0C6S8 592 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 RPL14P50914 215 aaKnown RBP17.52■□□□□ 0.4
DDX28-201ENST00000332395 CLCN5P51795 746 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 COPAP53621 1224 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 ZNF235Q14590 738 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 PTAR1Q7Z6K3 402 aaPredicted RBP17.52■□□□□ 0.4
DDX28-201ENST00000332395 ULK2Q8IYT8 1036 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 LRRC43Q8N309 656 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 HEXDCQ8WVB3 486 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 SCLYQ96I15 445 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 CLPTM1LQ96KA5 538 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 CDK5RAP1Q96SZ6 601 aaKnown RBP17.52■□□□□ 0.4
DDX28-201ENST00000332395 OLFM1Q99784 485 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 PDFQ9HBH1 243 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 LRRC42Q9Y546 428 aa17.52■□□□□ 0.4
DDX28-201ENST00000332395 E9PBE3 544 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 SLC7A4O43246 635 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 KLHL41O60662 606 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 KRT36O76013 467 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 SLC6A4P31645 630 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 ATP5C1P36542 298 aaKnown RBP17.52■□□□□ 0.39
DDX28-201ENST00000332395 KPNA2P52292 529 aaKnown RBP17.52■□□□□ 0.39
DDX28-201ENST00000332395 PRKAA1Q13131 559 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 RCN1Q15293 331 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 CILP2Q8IUL8 1156 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 PHTF2Q8N3S3 785 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 OR6P1Q8NGX9 317 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 OR52B2Q96RD2 323 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 MRPL57Q9BQC6 102 aaKnown RBP17.52■□□□□ 0.39
DDX28-201ENST00000332395 TCF7L2Q9NQB0 619 aa17.52■□□□□ 0.39
DDX28-201ENST00000332395 SCN5AQ14524 2016 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 A0A0D9SEW6 157 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 EME2A4GXA9 379 aaPredicted RBP17.51■□□□□ 0.39
DDX28-201ENST00000332395 CCL22O00626 93 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 HDAC3O15379 428 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 DCXO43602 365 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 LDB2O43679 373 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 ACSL4O60488 711 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 PQBP1O60828 265 aaKnown RBP17.51■□□□□ 0.39
DDX28-201ENST00000332395 PSMG1O95456 288 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 RPL17P18621 184 aaKnown RBP17.51■□□□□ 0.39
DDX28-201ENST00000332395 PEX19P40855 299 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 PTDSS1P48651 473 aaKnown RBP17.51■□□□□ 0.39
DDX28-201ENST00000332395 ARSDP51689 593 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 HK2P52789 917 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 CSHL1Q14406 222 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 C5orf22Q49AR2 442 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 FSCBQ5H9T9 825 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 METTL21CQ5VZV1 264 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 SLC8B1Q6J4K2 584 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 GALNT7Q86SF2 657 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX28-201ENST00000332395 PNPLA1Q8N8W4 532 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 STMN2Q93045 179 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 HDAC10Q969S8 669 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 CMTM5Q96DZ9 223 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 IFT43Q96FT9 208 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 MFSD1Q9H3U5 465 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 IGSF5Q9NSI5 407 aa17.51■□□□□ 0.39
DDX28-201ENST00000332395 ZBTB14O43829 449 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 PRAMEP78395 509 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 SLC25A3Q00325 362 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 ASPHQ12797 758 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 CMPK2Q5EBM0 449 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 NET1Q7Z628 596 aaPredicted RBP17.5■□□□□ 0.39
DDX28-201ENST00000332395 LSMEM2Q8N112 164 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 CFAP61Q8NHU2 1237 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 FEM1CQ96JP0 617 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 ZNF512Q96ME7 567 aaPredicted RBP17.5■□□□□ 0.39
DDX28-201ENST00000332395 SH3GL3Q99963 347 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 NACA2Q9H009 215 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 MTRRQ9UBK8 725 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 SLC7A8Q9UHI5 535 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 ZDHHC2Q9UIJ5 367 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 CIB2O75838 187 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 TFEBP19484 476 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 HLA-DPA1P20036 260 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 OR1D2P34982 312 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms