RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 RCOR3Q9P2K3 495 aaPredicted RBP16.69■□□□□ 0.26
NSMCE3-201ENST00000332303 COL1A2P08123 1366 aa16.69■□□□□ 0.26
NSMCE3-201ENST00000332303 TRIM38O00635 465 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 AZIN1O14977 448 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 BANF1O75531 89 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 TSPAN19P0C672 248 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 UQCRBP14927 111 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 CCR4P51679 360 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 TNK2Q07912 1038 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SMARCB1Q12824 385 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 TTC27Q6P3X3 843 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 GPR180Q86V85 440 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 POP5Q969H6 163 aaKnown RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 PPP1R14AQ96A00 147 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 PWWP2AQ96N64 755 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 ADI1Q9BV57 179 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SPRTNQ9H040 489 aaPredicted RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 NR2E3Q9Y5X4 410 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 ATRNO75882 1429 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SERPINA6P08185 405 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 NOMO1Q15155 1222 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 RGMBQ6NW40 437 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 FAM20CQ8IXL6 584 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 TMEM199Q8N511 208 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 FIBCD1Q8N539 461 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SLITRK2Q9H156 845 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 BPIFA1Q9NP55 256 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 WNT7AO00755 349 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 AVILO75366 819 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 OR6A2O95222 327 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 DRD4P21917 467 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 TRAF3Q13114 568 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 NOGQ13253 232 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 BIKQ13323 160 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 OR4L1Q8NH43 312 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 FNIP1Q8TF40 1166 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SPATA5L1Q9BVQ7 753 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 RPL26L1Q9UNX3 145 aaKnown RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 PIAS1O75925 651 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 BRCC3P46736 316 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 RPL38P63173 70 aaKnown RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 BNIP2Q12982 314 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 ZNF549Q6P9A3 640 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SH3BP5LQ7L8J4 393 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 RBFAQ8N0V3 343 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 GLOD4Q9HC38 313 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 KLHL1Q9NR64 748 aa16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
NSMCE3-201ENST00000332303 SLC28A1O00337 649 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 KPNA4O00629 521 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 CDC42P60953 191 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 TOP3AQ13472 1001 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 VSTM1Q6UX27 236 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 GCNT7Q6ZNI0 430 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 ULK2Q8IYT8 1036 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 MPP4Q96JB8 637 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 CYLDQ9NQC7 956 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 DDX18Q9NVP1 670 aaKnown RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 PDE4DIPQ5VU43 2346 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 CCNE2O96020 404 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 EVX2Q03828 476 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 COL26A1Q96A83 441 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 MRPL45Q9BRJ2 306 aaKnown RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 ENO2P09104 434 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 SDHAF4Q5VUM1 108 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 C11orf88Q6PI97 169 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 IQCKQ8N0W5 287 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 PCDHB18PQ96TA0 734 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 GPR20Q99678 358 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 DAPK2Q9UIK4 370 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 SMIM28A0A1B0GU29 152 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 TRAFD1O14545 582 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 EPHA3P29320 983 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 TAF5Q15542 800 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 ZNHIT3Q15649 155 aaPredicted RBP16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 DET1Q7L5Y6 550 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 TRPM4Q8TD43 1214 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 CXorf40BQ96DE9 158 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 MARK4Q96L34 752 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 SLC39A8Q9C0K1 460 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 NUAK2Q9H093 628 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 GSTK1Q9Y2Q3 226 aa16.67■□□□□ 0.26
NSMCE3-201ENST00000332303 EDF1O60869 148 aaKnown RBP16.66■□□□□ 0.26
NSMCE3-201ENST00000332303 SMIM11AP58511 58 aa16.66■□□□□ 0.26
NSMCE3-201ENST00000332303 TARBP2Q15633 366 aaKnown RBP16.66■□□□□ 0.26
NSMCE3-201ENST00000332303 CPSF6Q16630 551 aaKnown RBP eCLIP16.66■□□□□ 0.26
NSMCE3-201ENST00000332303 TEX44Q53QW1 395 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms