RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 U3KQA8 63 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 TMCO5BA8MYB1 307 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 J3KR12 359 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 INSIG1O15503 277 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 FFAR2O15552 330 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 AQP9O43315 295 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 MT-CO3P00414 261 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 JUNDP17535 347 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 ERCC2P18074 760 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 PBX1P40424 430 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 THOP1P52888 689 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 IL10RBQ08334 325 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 UGP2Q16851 508 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 MACC1Q6ZN28 852 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 ARHGAP12Q8IWW6 846 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF653Q96CK0 615 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 ECHDC3Q96DC8 303 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 KLF15Q9UIH9 416 aa13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 BZW2Q9Y6E2 419 aaKnown RBP13.71□□□□□ -0.21
GTF3C6-201ENST00000329970 IGSF10Q6WRI0 2623 aa13.71□□□□□ -0.22
GTF3C6-201ENST00000329970 ATRXP46100 2492 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 EME2A4GXA9 379 aaPredicted RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 MMP20O60882 483 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 PIGNO95427 931 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 XPAP23025 273 aaPredicted RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 MMP12P39900 470 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 CLDN6P56747 220 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 DPYSQ14117 519 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 DPYSL2Q16555 572 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 KLHL40Q2TBA0 621 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 COL28A1Q2UY09 1125 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ZNF542PQ5EBM4 170 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 HGSNATQ68CP4 663 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ERAP2Q6P179 960 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 PHACTR4Q8IZ21 702 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 SNIP1Q8TAD8 396 aaKnown RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 CELF6Q96J87 481 aaKnown RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 BOCQ9BWV1 1114 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ATP13A3Q9H7F0 1226 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 RALYQ9UKM9 306 aaKnown RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 ARHGEF17Q96PE2 2063 aaPredicted RBP13.7□□□□□ -0.22
GTF3C6-201ENST00000329970 LOC400499M0QZD8 3231 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 DAPK3O43293 454 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 OPA1O60313 960 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 BUB1BO60566 1050 aaPredicted RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 PALMO75781 387 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 NEBLO76041 1014 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 SERPINC1P01008 464 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 SERPINA4P29622 427 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 EIF4A3P38919 411 aaKnown RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 BLKP51451 505 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 TPM4P67936 248 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 PIGHQ14442 188 aaPredicted RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 LRRC14Q15048 493 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 IRF4Q15306 451 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 BOLA3Q53S33 107 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 LRRC73Q5JTD7 316 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 SRLQ86TD4 932 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 NPWQ8N729 165 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 TSEN2Q8NCE0 465 aaKnown RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 GRAMD1AQ96CP6 724 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 DEPDC7Q96QD5 511 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 PSKH2Q96QS6 385 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 CINPQ9BW66 212 aaPredicted RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 SP110Q9HB58 689 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 APOBEC3BQ9UH17 382 aaKnown RBP13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 ATP8A1Q9Y2Q0 1164 aa13.69□□□□□ -0.22
GTF3C6-201ENST00000329970 A0A1W2PQ67 120 aa13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 LMO7DNF2Z398 122 aa13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 H3BRJ5 948 aa13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 TRAFD1O14545 582 aaPredicted RBP13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 DXOO77932 396 aaKnown RBP13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 C6P13671 934 aa13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 ITIH2P19823 946 aa13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 HSPA9P38646 679 aaKnown RBP13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 EIF2S3P41091 472 aaKnown RBP13.68□□□□□ -0.22
GTF3C6-201ENST00000329970 RGRP47804 291 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms