RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ARHGAP26Q9UNA1 814 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 WDR91A4D1P6 747 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 WFS1O76024 890 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 CR2P20023 1033 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 CSKP41240 450 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 SCNN1BP51168 640 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 PDE1BQ01064 536 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 SLC5A9Q2M3M2 681 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 TPGS1Q6ZTW0 290 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 SH3RF2Q8TEC5 729 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 IFT43Q96FT9 208 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 ATXN7L3BQ96GX2 97 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 FEM1CQ96JP0 617 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 RANBP9Q96S59 729 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 CXorf56Q9H5V9 222 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 VPS28Q9UK41 221 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 CLEC4EQ9ULY5 219 aa20.45■□□□□ 0.86
RIPPLY3-201ENST00000329553 CHD9Q3L8U1 2897 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 HEATR9A2RTY3 570 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 TPP1O14773 563 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 EPOP01588 193 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 DHRS4L1P0CG22 281 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 SPRP35270 261 aaPredicted RBP20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 ABCG1P45844 678 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 NTHL1P78549 312 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 ZNF697Q5TEC3 545 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 MFN1Q8IWA4 741 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 CMTM8Q8IZV2 173 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 ZNF398Q8TD17 642 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 INPP5DQ92835 1189 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 TMEM237Q96Q45 408 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 MCMBPQ9BTE3 642 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 PRKD2Q9BZL6 878 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 MKS1Q9NXB0 559 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 C15orf41Q9Y2V0 281 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 PLLPQ9Y342 182 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 LAMA3Q16787 3333 aa20.44■□□□□ 0.86
RIPPLY3-201ENST00000329553 T-ENOLP0DO92 83 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 LIMK2P53671 638 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 SHHQ15465 462 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 FSTL4Q6MZW2 842 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 GPATCH11Q8N954 259 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 RIN3Q8TB24 985 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 VPS11Q9H270 941 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 NOP53Q9NZM5 478 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 PDE4DIPQ5VU43 2346 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 INSIG1O15503 277 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 FGF19O95750 216 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 TOP3BO95985 862 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 TARSP26639 723 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 HOXA9P31269 272 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 CRHR1P34998 444 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 AVPR1AP37288 418 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 MPPE1Q53F39 396 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 TSTD2Q5T7W7 516 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 RBM23Q86U06 439 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 APCDD1Q8J025 514 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 DCLK2Q8N568 766 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 ACMSDQ8TDX5 336 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 IQCGQ9H095 443 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 TASP1Q9H6P5 420 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 VPS51Q9UID3 782 aa20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 MTO1Q9Y2Z2 717 aaKnown RBP20.43■□□□□ 0.86
RIPPLY3-201ENST00000329553 TMCC1O94876 653 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 HLA-DPA1P20036 260 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 CSE1LP55060 971 aaKnown RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 GPM6BQ13491 265 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 PDE1CQ14123 709 aaPredicted RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 GALNT3Q14435 633 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 MPP7Q5T2T1 576 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 ARMC3Q5W041 872 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 KIAA0930Q6ICG6 404 aaPredicted RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 N4BP2L2Q92802 583 aaPredicted RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 TRIB3Q96RU7 358 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 SCUBE2Q9NQ36 999 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 HAO1Q9UJM8 370 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 GBF1Q92538 1859 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 HNRNPA1P09651 372 aaKnown RBP eCLIP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 PAMP19021 973 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 DDX6P26196 483 aaKnown RBP eCLIP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 GABRB3P28472 473 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 DENND6AQ8IWF6 608 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 CNTN4Q8IWV2 1026 aa20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 USP13Q92995 863 aaPredicted RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 SLC7A6OSQ96CW6 309 aaPredicted RBP20.42■□□□□ 0.86
RIPPLY3-201ENST00000329553 E2F8A0AVK6 867 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 MROH6A6NGR9 719 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 TRAFD1O14545 582 aaPredicted RBP20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 MT-CO1P00395 513 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 PRKCGP05129 697 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 FGF1P05230 155 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 TYK2P29597 1187 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 CTBP1Q13363 440 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 SLC14A2Q15849 920 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 PPM1JQ5JR12 505 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 FYB2Q5VWT5 728 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 NLRP9Q7RTR0 991 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 GRASPQ7Z6J2 395 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms