RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 RPLP0P6Q8NHW5 317 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 PLEKHG4BQ96PX9 1271 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 TCF12Q99081 682 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ZDHHC6Q9H6R6 413 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 USP29Q9HBJ7 922 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ANLNQ9NQW6 1124 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ITM2CQ9NQX7 267 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 INTS6Q9UL03 887 aaKnown RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 PPM1HQ9ULR3 514 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SNX10Q9Y5X0 201 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 MIA3Q5JRA6 1907 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 GOLGB1Q14789 3259 aaKnown RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 USP27XA6NNY8 438 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ENC1O14682 589 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 IFNB1P01574 187 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 PECAM1P16284 738 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 CD6P30203 668 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 DNA2P51530 1060 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SGSHP51688 502 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 WNT3AP56704 352 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 RPS14P62263 151 aaKnown RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SKOR1P84550 965 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SGCGQ13326 291 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SIX1Q15475 284 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 PCID2Q5JVF3 399 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 SPANXN3Q5MJ09 141 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 LRRC8EQ6NSJ5 796 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 CYS1Q717R9 158 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 GALNT7Q86SF2 657 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 CIR1Q86X95 450 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF567Q8N184 647 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF687Q8N1G0 1237 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 PGBD3Q8N328 593 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 GAB3Q8WWW8 586 aa5.21□□□□□ -1.58
LRIT3-201ENST00000327908 MCCC1Q96RQ3 725 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 TDRD1Q9BXT4 1180 aaKnown RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 DNMT3AQ9Y6K1 912 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 MUC22E2RYF6 1773 aaPredicted RBP5.21□□□□□ -1.58
LRIT3-201ENST00000327908 LOC285095A0A1B0GVY8 99 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SDR42E2A6NKP2 422 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 NEMP1O14524 444 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KPNA5O15131 536 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SNAP91O60641 907 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SIN3BO75182 1162 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 HLA-DQB2P05538 268 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 TCF4P15884 667 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 NFKB1P19838 968 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 ITGALP20701 1170 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SDHBP21912 280 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 LPOP22079 712 aaPredicted RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PSMA3P25788 255 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SLC8A1P32418 973 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 STX2P32856 288 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 IL12RB1P42701 662 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SCNN1BP51168 640 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 WASHC5Q12768 1159 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 GPS1Q13098 491 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 GTF2H3Q13889 308 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 ITIH4Q14624 930 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PTPRNQ16849 979 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 LGSNQ5TDP6 509 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KIAA0895LQ68EN5 471 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 AFTPHQ6ULP2 937 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KIAA1324Q6UXG2 1013 aaKnown RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KIAA0408Q6ZU52 694 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SDCCAG8Q86SQ7 713 aaPredicted RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 RELL1Q8IUW5 271 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 FAM71DQ8N9W8 422 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 OR2A12Q8NGT7 310 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 CAPZA3Q96KX2 299 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 CASS4Q9NQ75 786 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 RAB6BQ9NRW1 208 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PLK2Q9NYY3 685 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 NCKIPSDQ9NZQ3 722 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KLHL42Q9P2K6 505 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PACSIN2Q9UNF0 486 aaPredicted RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 COL4A3Q01955 1670 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 TCRBV21S2A2A0A5A6 115 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 I6L893 689 aaPredicted RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KPNA3O00505 521 aaPredicted RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PLRG1O43660 514 aaKnown RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 NARSO43776 548 aaKnown RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PEX11BO96011 259 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 VCLP18206 1134 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 OGNP20774 298 aaKnown RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 PSMD8P48556 350 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 BLKP51451 505 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SATB1Q01826 763 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 CREB5Q02930 508 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 IZUMO3Q5VZ72 239 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 KDELC1Q6UW63 502 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 TRMT10CQ7L0Y3 403 aaKnown RBP5.2□□□□□ -1.58
LRIT3-201ENST00000327908 C12orf40Q86WS4 652 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 HORMAD1Q86X24 394 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 C1orf210Q8IVY1 113 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 FLCNQ8NFG4 579 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 RIN3Q8TB24 985 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 COG1Q8WTW3 980 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 C1orf54Q8WWF1 131 aa5.2□□□□□ -1.58
LRIT3-201ENST00000327908 SCRN2Q96FV2 425 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms