RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IGSF5Q9NSI5 407 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 TBC1D13Q9NVG8 400 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 CFLARO15519 480 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 MT-CYBP00156 380 aaPredicted RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 PENKP01210 267 aaPredicted RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 C8BP07358 591 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 CTSHP09668 335 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 PAX3P23760 479 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 SLC12A2P55011 1212 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 PKNOX1P55347 436 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 KCNA10Q16322 511 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 IRAK1BP1Q5VVH5 260 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 RWDD4Q6NW29 188 aaKnown RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 ALDH16A1Q8IZ83 802 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 LILRA2Q8N149 483 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 TMEM102Q8N9M5 508 aaPredicted RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 RIN3Q8TB24 985 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 MYLPFQ96A32 169 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 PPP1R36Q96LQ0 422 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 RANBP9Q96S59 729 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 FTHL17Q9BXU8 183 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 UNC93B1Q9H1C4 597 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 CHST12Q9NRB3 414 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 G3BP2Q9UN86 482 aaKnown RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 AP4B1Q9Y6B7 739 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 SHROOM3Q8TF72 1996 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 CLCNKBP51801 687 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 INHBCP55103 352 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 NRG1Q02297 640 aaPredicted RBP20.04■□□□□ 0.8
SOX2-201ENST00000325404 PTK2BQ14289 1009 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 PPP2R5DQ14738 602 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 TECRLQ5HYJ1 363 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 AGAP9Q5VTM2 703 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 NEPROQ6NW34 567 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 KLHDC9Q8NEP7 349 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 FATE1Q969F0 183 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 TSPAN17Q96FV3 270 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 POMKQ9H5K3 350 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 UBAP1Q9NZ09 502 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 NUP205Q92621 2012 aa20.04■□□□□ 0.8
SOX2-201ENST00000325404 IRAK2O43187 625 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 RBP1P09455 135 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 CPB1P15086 417 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 CLCN5P51795 746 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 PSME3P61289 254 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SULT2A1Q06520 285 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 ARHGAP36Q6ZRI8 547 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SPPL2BQ8TCT7 592 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SENP6Q9GZR1 1112 aaPredicted RBP20.03■□□□□ 0.8
SOX2-201ENST00000325404 COPS7BQ9H9Q2 264 aaPredicted RBP20.03■□□□□ 0.8
SOX2-201ENST00000325404 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 PACSIN3Q9UKS6 424 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 ST3GAL5Q9UNP4 418 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 GIT1Q9Y2X7 761 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 CYP11A1P05108 521 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 CST5P28325 142 aaPredicted RBP20.03■□□□□ 0.8
SOX2-201ENST00000325404 SLC26A3P40879 764 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 TRIM25Q14258 630 aaKnown RBP20.03■□□□□ 0.8
SOX2-201ENST00000325404 ADRM1Q16186 407 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 ZNF470Q6ECI4 717 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 HACD2Q6Y1H2 254 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SLC22A9Q8IVM8 553 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 DDI1Q8WTU0 396 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 PKP2Q99959 881 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 OMDQ99983 421 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 RTP3Q9BQQ7 232 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 TRMOQ9BU70 441 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SLC39A8Q9C0K1 460 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 SRRDQ9UH36 339 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 PCDHGA7Q9Y5G6 932 aa20.03■□□□□ 0.8
SOX2-201ENST00000325404 PAPSS2O95340 614 aaPredicted RBP20.02■□□□□ 0.8
SOX2-201ENST00000325404 CLPTM1O96005 669 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 TFAP2AP05549 437 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 ODC1P11926 461 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 HOXD10P28358 340 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 LEPRP48357 1165 aaKnown RBP20.02■□□□□ 0.8
SOX2-201ENST00000325404 ARTNQ5T4W7 220 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 CTU1Q7Z7A3 348 aaKnown RBP20.02■□□□□ 0.8
SOX2-201ENST00000325404 SATL1Q86VE3 508 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 USP13Q92995 863 aaPredicted RBP20.02■□□□□ 0.8
SOX2-201ENST00000325404 MRGPRX2Q96LB1 330 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 TRPV6Q9H1D0 765 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 ACSS2Q9NR19 701 aa20.02■□□□□ 0.8
SOX2-201ENST00000325404 TIMM13Q9Y5L4 95 aaPredicted RBP20.02■□□□□ 0.8
SOX2-201ENST00000325404 IPO13O94829 963 aaKnown RBP20.02■□□□□ 0.79
SOX2-201ENST00000325404 CHRNA1P02708 482 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 ATP4BP51164 291 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 MAP7Q14244 749 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 ZNF460Q14592 562 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 KLC3Q6P597 504 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 CNSTQ6PJW8 725 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 PCSK9Q8NBP7 692 aaKnown RBP20.02■□□□□ 0.79
SOX2-201ENST00000325404 C3orf58Q8NDZ4 430 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 ZNF419Q96HQ0 510 aaPredicted RBP20.02■□□□□ 0.79
SOX2-201ENST00000325404 GAD1Q99259 594 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 PKMYT1Q99640 499 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 FSD1LQ9BXM9 530 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 SLC2A11Q9BYW1 496 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 ABCC13Q9NSE7 274 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 OSER1Q9NX31 292 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms