RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PGBD3Q8N328 593 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 FSTL5Q8N475 847 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 KYQ8NBH2 561 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 MYOCQ99972 504 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 PHACTR1Q9C0D0 580 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ING2Q9H160 280 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 RHOJQ9H4E5 214 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 IRAK4Q9NWZ3 460 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 KCNK4Q9NYG8 393 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 NENFQ9UMX5 172 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 HS3ST4Q9Y661 456 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 DOCK2Q92608 1830 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 A0A0D9SEW6 157 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 TMEM233B4DJY2 109 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ENPEPQ07075 957 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 SLC9A4Q6AI14 798 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 PIGWQ7Z7B1 504 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 PCYOX1LQ8NBM8 494 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 GFM2Q969S9 779 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 RCN3Q96D15 328 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CNDP1Q96KN2 507 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 OSGEPL1Q9H4B0 414 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ZFP14Q9HCL3 533 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ACTL7AQ9Y615 435 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 HNRNPCL1O60812 293 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 LINC00032P0C843 101 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 SLC2A4P14672 509 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CRABP2P29373 138 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CTNNB1P35222 781 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 VHLP40337 213 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 PPM1LQ5SGD2 360 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 DOK6Q6PKX4 331 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 YTHDF3Q7Z739 585 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CNPY4Q8N129 248 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CEP70Q8NHQ1 597 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CYGBQ8WWM9 190 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 SYTL2Q9HCH5 934 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 HBS1LQ9Y450 684 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ENPP3O14638 875 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 CD3EAPO15446 510 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 LTA4HP09960 611 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SYN1P17600 705 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 GKP32189 559 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 HALP42357 657 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 GABRB2P47870 512 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PLOD1Q02809 727 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 STARD3Q14849 445 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 ANKS6Q68DC2 871 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 TTC23LQ6PF05 361 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 C16orf89Q6UX73 402 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PLD6Q8N2A8 252 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RTL3Q8N8U3 475 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MIPOL1Q8TD10 442 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MED8Q96G25 268 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 NAF1Q96HR8 494 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 NPAS2Q99743 824 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 HGH1Q9BTY7 390 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 BBS2Q9BXC9 721 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RUBCNLQ9H714 662 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 CPQQ9Y646 472 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 COL4A5P29400 1685 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 A0A1W2PQ45 241 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 A0A1W2PQ67 120 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 A0A1W2PQY0 241 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 HAPLN1P10915 354 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MC4RP32245 332 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 NFYCQ13952 458 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RALGPS1Q5JS13 557 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RPAINQ86UA6 219 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PIM3Q86V86 326 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MYO1HQ8N1T3 1032 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 DNAJB14Q8TBM8 379 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 TRIM4Q9C037 500 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 WARS2Q9UGM6 360 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 CD84Q9UIB8 345 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 OR6C75A6NL08 312 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 NEDD8-MDP1E9PL57 170 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SCAMP1O15126 338 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MATN3O15232 486 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 HDAC3O15379 428 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SYNCRIPO60506 623 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 TOMM70O94826 608 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SIX3O95343 332 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 UGT2B4P06133 528 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SLC1A2P43004 574 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 KPNA1P52294 538 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 GNA12Q03113 381 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 BNIP1Q12981 228 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 STX5Q13190 355 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 MAPRE2Q15555 327 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 NRF1Q16656 503 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms