RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TIGD7Q6NT04 549 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PIM3Q86V86 326 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PSMG2Q969U7 264 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 DCUN1D1Q96GG9 259 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PCDHAC1Q9H158 963 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 CLIC5Q9NZA1 410 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 UNCXA6NJT0 531 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 DUSP11O75319 330 aaKnown RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 FESP07332 822 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 ARSDP51689 593 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 NME5P56597 212 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PRAMEP78395 509 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 POU4F1Q01851 419 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PTK2BQ14289 1009 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PSMD5Q16401 504 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 GPR158Q5T848 1215 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 MAP3K21Q5TCX8 1036 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 MARC1Q5VT66 337 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PIWIL4Q7Z3Z4 852 aaKnown RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 SERINC5Q86VE9 423 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 OR52K2Q8NGK3 314 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PKMYT1Q99640 499 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 SP110Q9HB58 689 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PCDHGB4Q9UN71 923 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 NOD1Q9Y239 953 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PCDHGB5Q9Y5G0 923 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 A8MT66 165 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 B4GALT3O60512 393 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 SUPT7LO94864 414 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 CDH13P55290 713 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF33AQ06730 810 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PDAP1Q13442 181 aaKnown RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 IHHQ14623 411 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 TLR1Q15399 786 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 MANEALQ5VSG8 457 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF280BQ86YH2 543 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 PGAM4Q8N0Y7 254 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 MRPL1Q9BYD6 325 aaKnown RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 TRIM4Q9C037 500 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 A0A087X1B8 175 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 A0A0U1RQF3 1178 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 TRPC5OSA6NMA1 111 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 TNFRSF10BO14763 440 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 KCNC1P48547 511 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 RALGDSQ12967 914 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 EIF4EBP2Q13542 120 aaPredicted RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 AGAP9Q5VTM2 703 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 CUZD1Q86UP6 607 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 LILRA2Q8N149 483 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 CPSF7Q8N684 471 aaKnown RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 CNBD2Q96M20 576 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 CCDC28BQ9BUN5 200 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 ZDHHC7Q9NXF8 308 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 MARCH4Q9P2E8 410 aaPredicted RBP17.53■□□□□ 0.4
COL9A1-201ENST00000320755 Q9Y3F1 56 aa17.53■□□□□ 0.4
COL9A1-201ENST00000320755 HEATR9A2RTY3 570 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 AHCYL1O43865 530 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 TRPA1O75762 1119 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 YWHAQP27348 245 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 USP46P62068 366 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 TRIM32Q13049 653 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
COL9A1-201ENST00000320755 HECTD2Q5U5R9 776 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 KLC3Q6P597 504 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 MRPL10Q7Z7H8 261 aaKnown RBP17.52■□□□□ 0.4
COL9A1-201ENST00000320755 SETD3Q86TU7 594 aaPredicted RBP17.52■□□□□ 0.4
COL9A1-201ENST00000320755 APLFQ8IW19 511 aaPredicted RBP17.52■□□□□ 0.4
COL9A1-201ENST00000320755 OR9I1Q8NGQ6 314 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 SEMA6AQ9H2E6 1030 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.4
COL9A1-201ENST00000320755 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.4
COL9A1-201ENST00000320755 MYLKQ15746 1914 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 IPO13O94829 963 aaKnown RBP17.52■□□□□ 0.39
COL9A1-201ENST00000320755 CYP11A1P05108 521 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 LTA4HP09960 611 aaKnown RBP17.52■□□□□ 0.39
COL9A1-201ENST00000320755 PMLP29590 882 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 RENBPP51606 427 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 GK3PQ14409 553 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 TTC9BQ8N6N2 239 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 SPPL2BQ8TCT7 592 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 KLHL32Q96NJ5 620 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 PKP2Q99959 881 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 SLC25A51Q9H1U9 297 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 ZNF385DQ9H6B1 395 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 FBRSL1Q9HCM7 1045 aaKnown RBP17.52■□□□□ 0.39
COL9A1-201ENST00000320755 DSEQ9UL01 958 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 VWA7Q9Y334 891 aa17.52■□□□□ 0.39
COL9A1-201ENST00000320755 MYOCOSA0A1B0GUC4 107 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 M0QZQ0 153 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 NPHS1O60500 1241 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 GSTT1P30711 240 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 CDKN2DP55273 166 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 TBX4P57082 545 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 GEN1Q17RS7 908 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 LIN52Q52LA3 116 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 TECRLQ5HYJ1 363 aa17.51■□□□□ 0.39
COL9A1-201ENST00000320755 RAP1GAP2Q684P5 730 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms