RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 MAGEE1Q9HCI5 957 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 SARS2Q9NP81 518 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 C4BP0C0L5 1744 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 A0A0J9YYE9 177 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 CCDC182A6NF36 153 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 EFCAB10A6NFE3 127 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 TEX28O15482 410 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 SNNO75324 88 aaPredicted RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 F7P08709 466 aaPredicted RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 RBP1P09455 135 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 GOLGA7BQ2TAP0 167 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 FAM160B1Q5W0V3 765 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 NANOGP8Q6NSW7 305 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 ZNF773Q6PK81 442 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 DNAJC14Q6Y2X3 702 aaPredicted RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 KIAA0408Q6ZU52 694 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 UGT2B28Q9BY64 529 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 RMND5AQ9H871 391 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 A0A0A0MRY4 1105 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 DFFAO00273 331 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 GAS2O43903 313 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 CRYZL1O95825 349 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 TRAP1Q12931 704 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 POU6F1Q14863 301 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
PACS1-201ENST00000320580 GBA3Q9H227 469 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 IMPAD1Q9NX62 359 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.72■□□□□ 0.27
PACS1-201ENST00000320580 PCDHGB4Q9UN71 923 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 IFT52Q9Y366 437 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 PCDHGB5Q9Y5G0 923 aa16.72■□□□□ 0.27
PACS1-201ENST00000320580 SOCS2O14508 198 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 ZNF682O95780 498 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 CYP4B1P13584 511 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 SHMT1P34896 483 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 TXNL4AP83876 142 aaKnown RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 PCSK7Q16549 785 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 LILRB4Q8NHJ6 448 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 HDAC2Q92769 488 aaKnown RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 TBCDQ9BTW9 1192 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 SP140LQ9H930 580 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 WDR6Q9NNW5 1121 aaKnown RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 RAPGEFL1Q9UHV5 662 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 U3KQV3 271 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 COL18A1P39060 1754 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 C7orf72A4D263 438 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 CYP7B1O75881 506 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 CST1P01037 141 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 IL7RP16871 459 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 ELK4P28324 431 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 NFIAQ12857 509 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 TRIP4Q15650 581 aaPredicted RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 ANKRD26P1Q6NSI1 321 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 UGT3A1Q6NUS8 523 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 FEM1AQ9BSK4 669 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 SIK2Q9H0K1 926 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 SDCBP2Q9H190 292 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 MARF1Q9Y4F3 1742 aaKnown RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 BTN3A3O00478 584 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 PMPCBO75439 489 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 RECQL5O94762 991 aaPredicted RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 ATP5F1P24539 256 aaPredicted RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 MZF1P28698 734 aaPredicted RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 EMP3P54852 163 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 DDR2Q16832 855 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 XKR3Q5GH77 459 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 PIGGQ5H8A4 983 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 PLD5Q8N7P1 536 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 ZNF302Q9NR11 478 aa16.71■□□□□ 0.27
PACS1-201ENST00000320580 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
PACS1-201ENST00000320580 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
PACS1-201ENST00000320580 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.26
PACS1-201ENST00000320580 ZNF99A8MXY4 864 aaPredicted RBP16.7■□□□□ 0.26
PACS1-201ENST00000320580 SOAT2O75908 522 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 PRKCBP05771 671 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 MTHFD1P11586 935 aaKnown RBP16.7■□□□□ 0.26
PACS1-201ENST00000320580 AKR1D1P51857 326 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
PACS1-201ENST00000320580 C16orf62Q7Z3J2 963 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 NECAB2Q7Z6G3 386 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 LUZP2Q86TE4 346 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 LILRA2Q8N149 483 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 GALNT6Q8NCL4 622 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
PACS1-201ENST00000320580 MOCOSQ96EN8 888 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 LGMNQ99538 433 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 NPLQ9BXD5 320 aaPredicted RBP16.7■□□□□ 0.26
PACS1-201ENST00000320580 TEX13BQ9BXU2 312 aa16.7■□□□□ 0.26
PACS1-201ENST00000320580 PIM2Q9P1W9 311 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms