RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ABCB8Q9NUT2 735 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 MKI67P46013 3256 aaKnown RBP17.97■□□□□ 0.47
RAB39A-201ENST00000320578 GRXCR1A8MXD5 290 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 EDF1O60869 148 aaKnown RBP17.97■□□□□ 0.47
RAB39A-201ENST00000320578 AHSGP02765 367 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 LMAN2Q12907 356 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 ZNF77Q15935 545 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 SLC5A9Q2M3M2 681 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 ELAC2Q9BQ52 826 aaKnown RBP17.97■□□□□ 0.47
RAB39A-201ENST00000320578 ADGRE3Q9BY15 652 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 MANSC1Q9H8J5 431 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
RAB39A-201ENST00000320578 ANKRD6Q9Y2G4 727 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 MTO1Q9Y2Z2 717 aaKnown RBP17.97■□□□□ 0.47
RAB39A-201ENST00000320578 HCFC2Q9Y5Z7 792 aa17.97■□□□□ 0.47
RAB39A-201ENST00000320578 SCAMP3O14828 347 aaKnown RBP17.96■□□□□ 0.47
RAB39A-201ENST00000320578 GJB3O75712 270 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 CRTAMO95727 393 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 PRLP01236 227 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 SHHQ15465 462 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 PLEKHG6Q3KR16 790 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 FAM109BQ6ICB4 259 aaPredicted RBP17.96■□□□□ 0.47
RAB39A-201ENST00000320578 GPR150Q8NGU9 434 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 NSMCE3Q96MG7 304 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 SIRPGQ9P1W8 387 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 FBXO5Q9UKT4 447 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 USP15Q9Y4E8 981 aaPredicted RBP17.96■□□□□ 0.47
RAB39A-201ENST00000320578 RAI2Q9Y5P3 530 aa17.96■□□□□ 0.47
RAB39A-201ENST00000320578 CCDC195A0A1B0GUA6 201 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 COL6A2P12110 1019 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 GABRB3P28472 473 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 LEPRP48357 1165 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 CD151P48509 253 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 RHOAP61586 193 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 CCDC153Q494R4 210 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 SPATA21Q7Z572 469 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 CLEC14AQ86T13 490 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 SRLQ86TD4 932 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 APCDD1Q8J025 514 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 MARK1Q9P0L2 795 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 GGT7Q9UJ14 662 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 HELZP42694 1942 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 SLC9A3R1O14745 358 aaPredicted RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 FZD6O60353 706 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 SLC1A2P43004 574 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 RPL26P61254 145 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 DMC1Q14565 340 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 TAF1AQ15573 450 aaPredicted RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 LINGO4Q6UY18 593 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 TPGS1Q6ZTW0 290 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 GRASPQ7Z6J2 395 aaPredicted RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 ISG20Q96AZ6 181 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 C19orf43Q9BQ61 176 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 SMG9Q9H0W8 520 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 C12orf65Q9H3J6 166 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 HACD3Q9P035 362 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 PHTF1Q9UMS5 762 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 RPL26L1Q9UNX3 145 aaKnown RBP17.95■□□□□ 0.46
RAB39A-201ENST00000320578 CHKBQ9Y259 395 aa17.95■□□□□ 0.46
RAB39A-201ENST00000320578 MIA3Q5JRA6 1907 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 CCDC78A2IDD5 438 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 GOLGA8TH3BQL2 631 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 PLIN3O60664 434 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 RPP40O75818 363 aaKnown RBP17.94■□□□□ 0.46
RAB39A-201ENST00000320578 CSPG5O95196 566 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 BPGMP07738 259 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
RAB39A-201ENST00000320578 GALNT3Q14435 633 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 GRM3Q14832 879 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 DUSP6Q16828 381 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 CCDC91Q7Z6B0 441 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 ARMC2Q8NEN0 867 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 IRF7Q92985 503 aa17.94■□□□□ 0.46
RAB39A-201ENST00000320578 CDCA3Q99618 268 aaPredicted RBP17.94■□□□□ 0.46
RAB39A-201ENST00000320578 NLE1Q9NVX2 485 aaPredicted RBP17.94■□□□□ 0.46
RAB39A-201ENST00000320578 YBX2Q9Y2T7 364 aaKnown RBP17.94■□□□□ 0.46
RAB39A-201ENST00000320578 A0A096LPK6 155 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ANKRD66B4E2M5 251 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 PER2O15055 1255 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 TGDSO95455 350 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 C2P06681 752 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 HOXB8P17481 243 aaPredicted RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CRABP2P29373 138 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CLCN5P51795 746 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 PRAMEP78395 509 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 POU4F1Q01851 419 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ATG16L1Q676U5 607 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ZNF470Q6ECI4 717 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CILP2Q8IUL8 1156 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 DENND6AQ8IWF6 608 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 BLOC1S5Q8TDH9 187 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 HDAC10Q969S8 669 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 EXOC2Q96KP1 924 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 SPHK2Q9NRA0 654 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 INTS6Q9UL03 887 aaKnown RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 EMCNQ9ULC0 261 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms