RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 STC2O76061 302 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ABLIM3O94929 683 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SOD2P04179 222 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 APOA4P06727 396 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CHRNGP07510 517 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SERPINF2P08697 491 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 HOXD9P28356 352 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 CRABP2P29373 138 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GRIA4P48058 902 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 IDH3AP50213 366 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SCNN1BP51168 640 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SGSHP51688 502 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CDH4P55283 916 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CFAP157Q5JU67 520 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 RNF135Q8IUD6 432 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MCUR1Q96AQ8 359 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 TADA1Q96BN2 335 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SGF29Q96ES7 293 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 TBATAQ96M53 351 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PRICKLE1Q96MT3 831 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 CYP2S1Q96SQ9 504 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MAGEH1Q9H213 219 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 COG4Q9H9E3 785 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PDFQ9HBH1 243 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MAN1C1Q9NR34 630 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 YIPF1Q9Y548 306 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ARL5AQ9Y689 179 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 NYNRINQ9P2P1 1898 aaKnown RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 CBX4O00257 560 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 LDB2O43679 373 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CCR10P46092 362 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 POU4F1Q01851 419 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TNK2Q07912 1038 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 DLG1Q12959 904 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZNF177Q13360 481 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 TUBB3Q13509 450 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CSHL1Q14406 222 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 RABGAP1LQ5R372 815 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 LIPMQ5VYY2 423 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 LRRC8EQ6NSJ5 796 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CNKSR3Q6P9H4 555 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 KLHDC10Q6PID8 442 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZYG11AQ6WRX3 759 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 FAM43BQ6ZT52 329 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 KIAA0408Q6ZU52 694 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 C16orf59Q7L2K0 433 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CILP2Q8IUL8 1156 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 BBS5Q8N3I7 341 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TEX9Q8N6V9 391 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 MAGEC3Q8TD91 643 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 DIS3LQ8TF46 1054 aaKnown RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 OVCA2Q8WZ82 227 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TOP1MTQ969P6 601 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 WBP2Q969T9 261 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 VWCEQ96DN2 955 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZNF333Q96JL9 665 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CEP295NLQ96MC4 621 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TOX2Q96NM4 488 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 RANBP9Q96S59 729 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 OLFM1Q99784 485 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CCDC106Q9BWC9 280 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 SHCBP1LQ9BZQ2 653 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TLE6Q9H808 572 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
IFT88-201ENST00000319980 MID2Q9UJV3 735 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 AGO1Q9UL18 857 aaKnown RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 CRYL1Q9Y2S2 319 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 H3BNC9 293 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ZNF195O14628 629 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 SLC7A4O43246 635 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ENTPD5O75356 428 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 CLDN11O75508 207 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 KLHL2O95198 593 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 PAPSS2O95340 614 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 COL6A2P12110 1019 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 GM2AP17900 193 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 NCF2P19878 526 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 ELF1P32519 619 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 LEPRP48357 1165 aaKnown RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 POLD2P49005 469 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 MNX1P50219 401 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 OXCT1P55809 520 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 DEFB103AP81534 67 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 TWF1Q12792 350 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 BTG3Q14201 252 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 VEPH1Q14D04 833 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 C5orf22Q49AR2 442 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ARL13AQ5H913 290 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 ADGRF1Q5T601 910 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 FAM91A1Q658Y4 838 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 ICE2Q659A1 982 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 DNAJB7Q7Z6W7 309 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 TDRD5Q8NAT2 981 aaKnown RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 GABPB2Q8TAK5 448 aaPredicted RBP7.62□□□□□ -1.19
IFT88-201ENST00000319980 RDH11Q8TC12 318 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 STYXQ8WUJ0 223 aa7.62□□□□□ -1.19
IFT88-201ENST00000319980 HEXDCQ8WVB3 486 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms