RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 MMP13P45452 471 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 RABIFP47224 123 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 FOXC1Q12948 553 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 RALGPS1Q5JS13 557 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 Q6ZSR6 202 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 PTAR1Q7Z6K3 402 aaPredicted RBP29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 ABI3BPQ7Z7G0 1075 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 GLRX5Q86SX6 157 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 SPATS2Q86XZ4 545 aaKnown RBP29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 RHOT1Q8IXI2 618 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 VOPP1Q96AW1 172 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 SCUBE2Q9NQ36 999 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 DDX56Q9NY93 547 aaKnown RBP29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 PCDHA13Q9Y5I0 950 aa29.43■■■□□ 2.3
SYNGR1-202ENST00000318801 MMP20O60882 483 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 LCA5LO95447 670 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 RGRP47804 291 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 CLDN2P57739 230 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 IFI16Q16666 785 aaKnown RBP29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 LRRC73Q5JTD7 316 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 CPNE8Q86YQ8 564 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 WRAP53Q9BUR4 548 aaKnown RBP29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 GGT7Q9UJ14 662 aa29.42■■■□□ 2.3
SYNGR1-202ENST00000318801 ZNF487B1APH4 448 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 GARSP41250 739 aaKnown RBP29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 SHC2P98077 582 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 GALNT2Q10471 571 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 TMEM52BQ4KMG9 183 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 NCBP2-AS2Q69YL0 99 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 KYAT3Q6YP21 454 aaKnown RBP29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 GAS2L3Q86XJ1 694 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 VSIG1Q86XK7 387 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 OR13H1Q8NG92 308 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 SAP25Q8TEE9 199 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 IFT43Q96FT9 208 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 NUDCD1Q96RS6 583 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 PCDH12Q9NPG4 1184 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 ATP8A1Q9Y2Q0 1164 aa29.41■■■□□ 2.3
SYNGR1-202ENST00000318801 CCNCP24863 283 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 FAM193AP78312 1265 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 FGL2Q14314 439 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 HS1BP3Q53T59 392 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 GCNT7Q6ZNI0 430 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 GATAD2AQ86YP4 633 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 RAPGEF5Q92565 580 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 FAF2Q96CS3 445 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 RNF157Q96PX1 679 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 FTSJ1Q9UET6 329 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 EPN1Q9Y6I3 576 aaPredicted RBP29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 ANKRD36A6QL64 1941 aa29.4■■■□□ 2.3
SYNGR1-202ENST00000318801 RIOK3O14730 519 aaKnown RBP29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 TNFSF14O43557 240 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 MFSD11O43934 449 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 SOCS5O75159 536 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 ZFXP17010 805 aaPredicted RBP29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 CES1P23141 567 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 EPHA8P29322 1005 aaPredicted RBP29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 HADHBP55084 474 aaKnown RBP29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 ITKQ08881 620 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 CALR3Q96L12 384 aaKnown RBP29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 BMFQ96LC9 184 aa29.39■■■□□ 2.3
SYNGR1-202ENST00000318801 TOR1BO14657 336 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 MUSKO15146 869 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 PEX11BO96011 259 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 KRT10P13645 584 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 TNNT1P13805 278 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 PTK2BQ14289 1009 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 CCNYQ8ND76 341 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 FATE1Q969F0 183 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 ECHDC3Q96DC8 303 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 TSGA13Q96PP4 275 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 MGME1Q9BQP7 344 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 AMACRQ9UHK6 382 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 BTBD3Q9Y2F9 522 aa29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 TPRP12270 2363 aaKnown RBP29.39■■■□□ 2.29
SYNGR1-202ENST00000318801 CFAP69A5D8W1 941 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 POM121BA6NF01 834 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 GOLGA6L6A8MZA4 724 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 MATN3O15232 486 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 SPINT1O43278 529 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 LZTS3O60299 673 aaPredicted RBP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 KRT1P04264 644 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 FTH1P19P0C7X4 201 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 COMTP21964 271 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 THOP1P52888 689 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 NDUFAF2Q8N183 169 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 BAHD1Q8TBE0 780 aaPredicted RBP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 PDCD6IPQ8WUM4 868 aaKnown RBP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 CENPTQ96BT3 561 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 KLF6Q99612 283 aaPredicted RBP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 POLR1EQ9GZS1 481 aaKnown RBP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 NT5MQ9NPB1 228 aa29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.38■■■□□ 2.29
SYNGR1-202ENST00000318801 A0A0A6YYK5 440 aaPredicted RBP29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 RAD51BO15315 384 aa29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 NDUFA10O95299 355 aa29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 ITIH2P19823 946 aa29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 LIG3P49916 1009 aa29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 YPEL5P62699 121 aa29.37■■■□□ 2.29
SYNGR1-202ENST00000318801 BNIP3Q12983 259 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms