RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 UBA6A0AVT1 1052 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 LSM1O15116 133 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 KPNA6O60684 536 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 TPSB2P20231 275 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 HMOX2P30519 316 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 CDH5P33151 784 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 CLCN2P51788 898 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 POLD3Q15054 466 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 TPSAB1Q15661 275 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 C6orf10Q5SRN2 563 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 NCCRP1Q6ZVX7 275 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 RBM12BQ8IXT5 1001 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 ACMSDQ8TDX5 336 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 ALG2Q9H553 416 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 ZNF696Q9H7X3 374 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PIGVQ9NUD9 493 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 A0A087WXM4 84 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 DHRS12A0PJE2 317 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 NOBOXO60393 691 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 RSL1D1O76021 490 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 BCL10O95999 233 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 SNRPB2P08579 225 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 GFAPP14136 432 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PTPN3P26045 913 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 HALP42357 657 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 BMXP51813 675 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 RAB39AQ14964 217 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 LCLAT1Q6UWP7 414 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 MILR1Q7Z6M3 343 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 Q8N9G6 341 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 HTRA1Q92743 480 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PABPC5Q96DU9 382 aaKnown RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 CCDC28BQ9BUN5 200 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 ABCG8Q9H221 673 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 SEMA4BQ9NPR2 832 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-201ENST00000318607 INIPQ9NRY2 104 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PCDHGA7Q9Y5G6 932 aa14.31□□□□□ -0.12
PABPC1-201ENST00000318607 PEX14O75381 377 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-201ENST00000318607 CDH3P22223 829 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 SEPHS1P49903 392 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 HMBOX1Q6NT76 420 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 RNF19BQ6ZMZ0 732 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 TFAP2DQ7Z6R9 452 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 CUZD1Q86UP6 607 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 ZC3H15Q8WU90 426 aaKnown RBP14.3□□□□□ -0.12
PABPC1-201ENST00000318607 ZMAT2Q96NC0 199 aaKnown RBP14.3□□□□□ -0.12
PABPC1-201ENST00000318607 TBCDQ9BTW9 1192 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 MID1IP1Q9NPA3 183 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 DYTNA2CJ06 578 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 TIMM44O43615 452 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 GMNNO75496 209 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 PGK1P00558 417 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 TGFBIQ15582 683 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 PFKFB4Q16877 469 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 NANOGNBQ7Z5D8 188 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 HS3ST5Q8IZT8 346 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 NPWQ8N729 165 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 OSMRQ99650 979 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 DRC3Q9H069 523 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 BRD8Q9H0E9 1235 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 STN1Q9H668 368 aaKnown RBP14.3□□□□□ -0.12
PABPC1-201ENST00000318607 MORF4L1Q9UBU8 362 aa14.3□□□□□ -0.12
PABPC1-201ENST00000318607 SDHDO14521 159 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 FAM163BP0C2L3 166 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 PSMA4P25789 261 aaKnown RBP14.29□□□□□ -0.12
PABPC1-201ENST00000318607 RCVRNP35243 200 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 TKTL1P51854 596 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 GPR158Q5T848 1215 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 ANKRD34AQ69YU3 496 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 CHERPQ8IWX8 916 aaKnown RBP14.29□□□□□ -0.12
PABPC1-201ENST00000318607 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 TRPC4APQ8TEL6 797 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 COX4I2Q96KJ9 171 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
PABPC1-201ENST00000318607 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 PRSS51A0A1B0GVH4 220 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 CFAP99D6REC4 459 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 FAM189A1O60320 539 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 B4GALT4O60513 344 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 SLC35E2BP0CK96 405 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 NAT2P11245 290 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 CYP4B1P13584 511 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.123e-36■□□□□ 10.8
PABPC1-201ENST00000318607 FASP25445 335 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 RELAQ04206 551 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 TAZQ16635 292 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 NANOGP8Q6NSW7 305 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 LSMEM2Q8N112 164 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 DHRSXQ8N5I4 330 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 CYP2S1Q96SQ9 504 aa14.29□□□□□ -0.12
PABPC1-201ENST00000318607 NXF3Q9H4D5 531 aaKnown RBP14.29□□□□□ -0.12
PABPC1-201ENST00000318607 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
PABPC1-201ENST00000318607 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms