RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 BPTFQ12830 3046 aa20.31■□□□□ 0.84
SERF1A-201ENST00000317633 LGALS16A8MUM7 142 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 MUSKO15146 869 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 RBMS1P29558 406 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 TMPRSS3P57727 454 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 C1orf61Q13536 156 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 TMEM52BQ4KMG9 183 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 SASS6Q6UVJ0 657 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 CLEC17AQ6ZS10 378 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 RBM43Q6ZSC3 357 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 FSTL5Q8N475 847 aaPredicted RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 TP53I13Q8NBR0 393 aaPredicted RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 KCNE4Q8WWG9 221 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 SCG3Q8WXD2 468 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 NAF1Q96HR8 494 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 LRRC61Q9BV99 259 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 KLC2Q9H0B6 622 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 TCEAL2Q9H3H9 227 aaPredicted RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 MBNL1Q9NR56 388 aaKnown RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 ANO10Q9NW15 660 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 UBA2Q9UBT2 640 aaPredicted RBP20.3■□□□□ 0.84
SERF1A-201ENST00000317633 DOLKQ9UPQ8 538 aa20.3■□□□□ 0.84
SERF1A-201ENST00000317633 GCATO75600 419 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 HTR1BP28222 390 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 TPI1P60174 286 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 RPL7AP62424 266 aaKnown RBP20.29■□□□□ 0.84
SERF1A-201ENST00000317633 MYL5Q02045 173 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 LRRC14Q15048 493 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 ELOCQ15369 112 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 C3orf38Q5JPI3 329 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 CFAP58Q5T655 872 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 PPP1R2P3Q6NXS1 205 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 ERGIC2Q96RQ1 377 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 DPH1Q9BZG8 443 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 SUV39H2Q9H5I1 410 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 LHX3Q9UBR4 397 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 SATB2Q9UPW6 733 aa20.29■□□□□ 0.84
SERF1A-201ENST00000317633 COL27A1Q8IZC6 1860 aaPredicted RBP20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ANKRD36A6QL64 1941 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 TCRBV5S1A1TA0A578 114 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 LRRC10BA6NIK2 292 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 YY2O15391 372 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ALPIP09923 528 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 CTSEP14091 401 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 TSHRP16473 764 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 FERP16591 822 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ITIH2P19823 946 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 NDST2P52849 883 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 IRF4Q15306 451 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 CYTH1Q15438 398 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 UGP2Q16851 508 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ACAD10Q6JQN1 1059 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ERAP2Q6P179 960 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 SLC35F3Q8IY50 421 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 SDR16C5Q8N3Y7 309 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 NETO2Q8NC67 525 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ATL2Q8NHH9 583 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 EXOC2Q96KP1 924 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ZNF641Q96N77 438 aaPredicted RBP20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ASCL3Q9NQ33 180 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 PADI4Q9UM07 663 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 PCDHGA8Q9Y5G5 932 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 ENTPD2Q9Y5L3 495 aa20.28■□□□□ 0.84
SERF1A-201ENST00000317633 TSPAN11A1L157 253 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 EIF3CLB5ME19 914 aaKnown RBP20.27■□□□□ 0.84
SERF1A-201ENST00000317633 INSIG1O15503 277 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 PIGNO95427 931 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 SPIDRQ14159 915 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 STX1AQ16623 288 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 PERM1Q5SV97 790 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 PPP1R15BQ5SWA1 713 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 BRAT1Q6PJG6 821 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 LVRNQ6Q4G3 990 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 CRTC1Q6UUV9 634 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 MCOLN2Q8IZK6 566 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 CCDC97Q96F63 343 aaPredicted RBP20.27■□□□□ 0.84
SERF1A-201ENST00000317633 ATXN7L3BQ96GX2 97 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 VCPIP1Q96JH7 1222 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 TUBGCP5Q96RT8 1024 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 EIF3CQ99613 913 aaKnown RBP20.27■□□□□ 0.84
SERF1A-201ENST00000317633 CCDC3Q9BQI4 270 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 CLPBQ9H078 707 aa20.27■□□□□ 0.84
SERF1A-201ENST00000317633 PNMA8BQ9ULN7 279 aaPredicted RBP20.27■□□□□ 0.84
SERF1A-201ENST00000317633 KIF26BQ2KJY2 2108 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 ARHGAP42A6NI28 874 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 ERVH48-1M5A8F1 160 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 KLK10O43240 276 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 RASGRP1O95267 797 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 PRB1P04280 392 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 MLLT3P42568 568 aaPredicted RBP20.26■□□□□ 0.83
SERF1A-201ENST00000317633 HK3P52790 923 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 AGERQ15109 404 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 HID1Q8IV36 788 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 ARL14Q8N4G2 192 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 ARL10Q8N8L6 244 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 WDR36Q8NI36 951 aaKnown RBP20.26■□□□□ 0.83
SERF1A-201ENST00000317633 SLC46A1Q96NT5 459 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 EDEM3Q9BZQ6 932 aa20.26■□□□□ 0.83
SERF1A-201ENST00000317633 LRRC19Q9H756 370 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms