RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 K7ESM1 405 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 AQP9O43315 295 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 TPM3P06753 285 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 GIMD1P0DJR0 217 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 ITIH2P19823 946 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 PBX1P40424 430 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 BCL2L1Q07817 233 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 LRRC14Q15048 493 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 DPYSL2Q16555 572 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 HGSNATQ68CP4 663 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 CYP4V2Q6ZWL3 525 aaPredicted RBP17.92■□□□□ 0.46
TPM1-203ENST00000317516 CAMK1DQ8IU85 385 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 ARHGAP12Q8IWW6 846 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
TPM1-203ENST00000317516 ZNF548Q8NEK5 533 aaPredicted RBP17.92■□□□□ 0.46
TPM1-203ENST00000317516 APOLD1Q96LR9 279 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 ZNF599Q96NL3 588 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 IL12RB2Q99665 862 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 NRSN2Q9GZP1 204 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 ABCG4Q9H172 646 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 PCDH12Q9NPG4 1184 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 SEPT3Q9UH03 358 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 IP6K2Q9UHH9 426 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 RAXQ9Y2V3 346 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 AK5Q9Y6K8 562 aa17.92■□□□□ 0.46
TPM1-203ENST00000317516 TRPM6Q9BX84 2022 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 CHD6Q8TD26 2715 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 TPP1O14773 563 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 BUB1BO60566 1050 aaPredicted RBP17.91■□□□□ 0.46
TPM1-203ENST00000317516 GP1BAP07359 652 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 IGFALSP35858 605 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 EIF4A3P38919 411 aaKnown RBP17.91■□□□□ 0.46
TPM1-203ENST00000317516 PEX5P50542 639 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 BLKP51451 505 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 INSM1Q01101 510 aaPredicted RBP17.91■□□□□ 0.46
TPM1-203ENST00000317516 DPYSQ14117 519 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 ZCCHC8Q6NZY4 707 aaKnown RBP17.91■□□□□ 0.46
TPM1-203ENST00000317516 TMCO3Q6UWJ1 677 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 LMX1AQ8TE12 382 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 HSPH1Q92598 858 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 GLMNQ92990 594 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 TBATAQ96M53 351 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 SLC13A1Q9BZW2 595 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 THAP2Q9H0W7 228 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 LHX6Q9UPM6 363 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 ATP8A1Q9Y2Q0 1164 aa17.91■□□□□ 0.46
TPM1-203ENST00000317516 CFAP69A5D8W1 941 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 MYO1FO00160 1098 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 LZTS3O60299 673 aaPredicted RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 NEBLO76041 1014 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 MT-CO3P00414 261 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 HTR1BP28222 390 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 SCNN1BP51168 640 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 CLDN6P56747 220 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 PPARDQ03181 441 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 EIF2B5Q13144 721 aaKnown RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 SMTNL2Q2TAL5 461 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 FAXCQ5TGI0 409 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 ALKBH5Q6P6C2 394 aaKnown RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 MACC1Q6ZN28 852 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 POLNQ7Z5Q5 900 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 BBS5Q8N3I7 341 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 NPWQ8N729 165 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 TP53I13Q8NBR0 393 aaPredicted RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 ATL2Q8NHH9 583 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 NSMCE1Q8WV22 266 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 TEKT4Q8WW24 435 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 PSKH2Q96QS6 385 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 MBNL1Q9NR56 388 aaKnown RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.9■□□□□ 0.46
TPM1-203ENST00000317516 APOBEC3BQ9UH17 382 aaKnown RBP17.9■□□□□ 0.46
TPM1-203ENST00000317516 KLF15Q9UIH9 416 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 GPSM3Q9Y4H4 160 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.9■□□□□ 0.461e-6■■■□□ 19.1
TPM1-203ENST00000317516 ASPMQ8IZT6 3477 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 CHD5Q8TDI0 1954 aa17.9■□□□□ 0.46
TPM1-203ENST00000317516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.89■□□□□ 0.45
TPM1-203ENST00000317516 A0A1W2PQ67 120 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 RARAP10276 462 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 C6P13671 934 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 IL1R2P27930 398 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 SERPINB6P35237 376 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 HSPA9P38646 679 aaKnown RBP17.89■□□□□ 0.45
TPM1-203ENST00000317516 RPIAP49247 311 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 LIG3P49916 1009 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 AP1S1P61966 158 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
TPM1-203ENST00000317516 RTP5Q14D33 572 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 AGERQ15109 404 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 HADHQ16836 314 aaKnown RBP17.89■□□□□ 0.45
TPM1-203ENST00000317516 WSCD2Q2TBF2 565 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
TPM1-203ENST00000317516 PRRT3Q5FWE3 981 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 CCDC122Q5T0U0 273 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 PHACTR4Q8IZ21 702 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 NIPA2Q8N8Q9 360 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 DCBLD1Q8N8Z6 715 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 NUP85Q9BW27 656 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms