RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SDK1Q7Z5N4 2213 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ABCA7Q8IZY2 2146 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3DA0A087WVF3 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3IA0A087WXS9 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3EA0A087X179 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3KA0A087X1G2 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 GOLGA6L9A6NEM1 432 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3FA6NER0 549 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 MEI4A8MW99 385 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 A8MX80 341 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3LB9A6J9 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RHOBTB1O94844 696 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PCDH8O95206 1070 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 IGLV3-19P01714 112 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 LMNAP02545 664 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 FGGP02679 453 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3HP0C7X1 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RBP3P10745 1247 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ADRB3P13945 408 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TIMP2P16035 220 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CR2P20023 1033 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ITPKAP23677 461 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ITGB7P26010 798 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CD86P42081 329 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NR2C2P49116 596 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NEK3P51956 506 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 IFI35P80217 286 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 ZNF33AQ06730 810 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 BCL2L1Q07817 233 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 WASHC5Q12768 1159 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 KLF1Q13351 362 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 PTPRRQ15256 657 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SLC45A4Q5BKX6 768 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ZNF805Q5CZA5 627 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CFAP58Q5T655 872 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 LYSMD4Q5XG99 296 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3GQ6DHY5 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3CQ6IPX1 549 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 FBXL19Q6PCT2 694 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SLC36A4Q6YBV0 504 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 BZW1Q7L1Q6 419 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 KDELC2Q7Z4H8 507 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RGL4Q8IZJ4 473 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TBC1D3Q8IZP1 549 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 TAB3Q8N5C8 712 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 ARRDC2Q8TBH0 407 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 HTR3CQ8WXA8 447 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PIGKQ92643 395 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PPP1R16AQ96I34 528 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 MS4A14Q96JA4 679 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 IL12RB2Q99665 862 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 MYOCQ99972 504 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 HINFPQ9BQA5 517 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 POLR1EQ9GZS1 481 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ARRDC1-AS1Q9H2J1 176 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SUV39H2Q9H5I1 410 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ATP13A3Q9H7F0 1226 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SGK2Q9HBY8 427 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NCDNQ9UBB6 729 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 FZD4Q9ULV1 537 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SCML1Q9UN30 329 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 EFR3BQ9Y2G0 817 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ATP8A1Q9Y2Q0 1164 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 A0A0U1RQS6 177 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 LRRC72A6NJI9 287 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 HACD1B0YJ81 288 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 PATE3B3GLJ2 98 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 NEMP1O14524 444 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 ZNF185O15231 689 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 KCNN4O15554 427 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 SPINT1O43278 529 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 PLRG1O43660 514 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 RNGTTO60942 597 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 IGHV4-34P06331 123 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 MMP2P08253 660 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 PRLRP16471 622 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CTPS1P17812 591 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 NFKB1P19838 968 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 XPAP23025 273 aaPredicted RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 SERPINA4P29622 427 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 CD68P34810 354 aaPredicted RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 HSPA9P38646 679 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 CSNK1DP48730 415 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 AP1S1P61966 158 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 NSUN2Q08J23 767 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDC42-201ENST00000315554 SPEM2Q0P670 501 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 SFSWAPQ12872 951 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 FOXD4Q12950 439 aaPredicted RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 PCSK7Q16549 785 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 LONRF2Q1L5Z9 754 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
CDC42-201ENST00000315554 SEL1L3Q68CR1 1132 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 KIAA0895LQ68EN5 471 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 LAIR1Q6GTX8 287 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 TCEAL6Q6IPX3 200 aa7.93□□□□□ -1.14
CDC42-201ENST00000315554 LAYNQ6UX15 382 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms