RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CELF6Q96J87 481 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 TSC2P49815 1807 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 FZD9O00144 591 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SOCS2O14508 198 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 TIPRLO75663 272 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 MAP3K7CLP57077 242 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 DNAJB13P59910 316 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 TUBA4AP68366 448 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 PHEXP78562 749 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SQLEQ14534 574 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 TGFBIQ15582 683 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 INTS6LQ5JSJ4 861 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 CATSPER4Q7RTX7 472 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 FAM47BQ8NA70 645 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 KCTD13Q8WZ19 329 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 ELMO2Q96JJ3 720 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SLC39A3Q9BRY0 314 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 YIPF2Q9BWQ6 316 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 PAIP1Q9H074 479 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 MEAF6Q9HAF1 191 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
SKA3-202ENST00000314759 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 TMEM181Q9P2C4 612 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SLC2A6Q9UGQ3 507 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 SBF1O95248 1867 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
SKA3-202ENST00000314759 H3BRB1 525 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ATE1O95260 518 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 MT-CYBP00156 380 aaPredicted RBP13.54□□□□□ -0.24
SKA3-202ENST00000314759 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
SKA3-202ENST00000314759 GNAO1P09471 354 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ATP5F1P24539 256 aaPredicted RBP13.54□□□□□ -0.24
SKA3-202ENST00000314759 SLC1A2P43004 574 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 AIF1P55008 147 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 GJA9P57773 515 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 PRKCQQ04759 706 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
SKA3-202ENST00000314759 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 MAPRE2Q15555 327 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
SKA3-202ENST00000314759 LINC00523Q86TU6 105 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 GPR180Q86V85 440 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 OR9I1Q8NGQ6 314 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 COL1A2P08123 1366 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 HUS1O60921 280 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 STAMBPO95630 424 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 POLD2P49005 469 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 TAF6P49848 677 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 NUP107P57740 925 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 RELAQ04206 551 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 GRIK4Q16099 956 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 PITRM1Q5JRX3 1037 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ARMCX2Q7L311 632 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 SULF1Q8IWU6 871 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 CANT1Q8WVQ1 401 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 TFAP2CQ92754 450 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ARMC7Q9H6L4 198 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 IGSF5Q9NSI5 407 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
SKA3-202ENST00000314759 ZNF839A8K0R7 811 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 AP3B1O00203 1094 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 MRASO14807 208 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 AURKAO14965 403 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 XPOTO43592 962 aaKnown RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 BMP10O95393 424 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CD4P01730 458 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CSHL1Q14406 222 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 C8orf82Q6P1X6 216 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 XKR5Q6UX68 686 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 ZNF419Q96HQ0 510 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 ADAMTS10Q9H324 1103 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 OR12D3Q9UGF7 316 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 NRP2O60462 931 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 SERPINB7O75635 380 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 BMP2P12643 396 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 NCAM1P13591 858 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CD247P20963 164 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 DNAJB2P25686 324 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 GSTM4Q03013 218 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms