RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RMDN1Q96DB5 314 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 VPS39Q96JC1 886 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 ADGRE3Q9BY15 652 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 LMAN2LQ9H0V9 348 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 CERS4Q9HA82 394 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 SNX15Q9NRS6 342 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 ABCB8Q9NUT2 735 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 LHX3Q9UBR4 397 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 FCF1Q9Y324 198 aaKnown RBP16.85■□□□□ 0.29
CLCF1-201ENST00000312438 MRPS23Q9Y3D9 190 aaKnown RBP16.85■□□□□ 0.29
CLCF1-201ENST00000312438 RAI2Q9Y5P3 530 aa16.85■□□□□ 0.29
CLCF1-201ENST00000312438 GLRA3O75311 464 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 CRTAMO95727 393 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 MT-CO1P00395 513 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 PRLP01236 227 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 CD70P32970 193 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 SERPINB4P48594 390 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 CTBP1Q13363 440 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ZNF77Q15935 545 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 TMEM25Q86YD3 366 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ARID3BQ8IVW6 561 aaPredicted RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 DENND6AQ8IWF6 608 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 LMNTD2Q8IXW0 634 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 RIN3Q8TB24 985 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 IRF7Q92985 503 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ATXN7L3BQ96GX2 97 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ZSWIM3Q96MP5 696 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 GPR22Q99680 433 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 MANSC1Q9H8J5 431 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 FBXO5Q9UKT4 447 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 PCDHGC4Q9Y5F7 938 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 SNX3O60493 162 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 PENKP01210 267 aaPredicted RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 GABRB3P28472 473 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 PBX2P40425 430 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ACVR1Q04771 509 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 DUSP6Q16828 381 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 SRLQ86TD4 932 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 ZNF557Q8N988 423 aaPredicted RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 CCDC197Q8NCU1 140 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 STYXQ8WUJ0 223 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 SMG7Q92540 1137 aaKnown RBP16.84■□□□□ 0.29
CLCF1-201ENST00000312438 LMLNQ96KR4 655 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 MFSD1Q9H3U5 465 aa16.84■□□□□ 0.29
CLCF1-201ENST00000312438 PRAMEF12O95522 483 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 NEFHP12036 1026 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 AP1S1P61966 158 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 PRAMEP78395 509 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 CBX2Q14781 532 aaPredicted RBP16.83■□□□□ 0.28
CLCF1-201ENST00000312438 GRM3Q14832 879 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 PPM1JQ5JR12 505 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 ZNF470Q6ECI4 717 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 TRIM42Q8IWZ5 723 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 ADGRG2Q8IZP9 1017 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 ARMC2Q8NEN0 867 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 HDAC10Q969S8 669 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 PBX4Q9BYU1 374 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 LINC00597Q9H2U6 94 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 SPHK2Q9NRA0 654 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 GGT7Q9UJ14 662 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
CLCF1-201ENST00000312438 KCTD3Q9Y597 815 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 ARL5AQ9Y689 179 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 CHD5Q8TDI0 1954 aa16.83■□□□□ 0.28
CLCF1-201ENST00000312438 ANKRD66B4E2M5 251 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 K7ERQ8 282 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 SLC9A3R1O14745 358 aaPredicted RBP16.82■□□□□ 0.28
CLCF1-201ENST00000312438 PAPLNO95428 1278 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 GSTA1P08263 222 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 PDHA1P08559 390 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 CEBPBP17676 345 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 WEE1P30291 646 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 SLC1A2P43004 574 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 MAPK8P45983 427 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 NRIP1P48552 1158 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 CSNK1DP48730 415 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 USP4Q13107 963 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 ZKSCAN8Q15776 578 aaPredicted RBP16.82■□□□□ 0.28
CLCF1-201ENST00000312438 PITRM1Q5JRX3 1037 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 CMC1Q7Z7K0 106 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 GALNT7Q86SF2 657 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 OR6P1Q8NGX9 317 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 SLC39A10Q9ULF5 831 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 PHTF1Q9UMS5 762 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 STARD13Q9Y3M8 1113 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 OBSL1O75147 1896 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 A0A096LPK6 155 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 NEDD8-MDP1E9PL57 170 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 BIRC5O15392 142 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 EDF1O60869 148 aaKnown RBP16.82■□□□□ 0.28
CLCF1-201ENST00000312438 C2P06681 752 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 F7P08709 466 aaPredicted RBP16.82■□□□□ 0.28
CLCF1-201ENST00000312438 HLA-FP30511 346 aa16.82■□□□□ 0.28
CLCF1-201ENST00000312438 ABCG1P45844 678 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 343.9 ms