RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ITPKAP23677 461 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SERPINA4P29622 427 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 MAT2AP31153 395 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CNR2P34972 360 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 NEK3P51956 506 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 OLIG2Q13516 323 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 BYSLQ13895 437 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CCDC6Q16204 474 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 UGP2Q16851 508 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ANKRD20A2Q5SQ80 823 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ANKRD20A1Q5TYW2 823 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ANKRD20A3Q5VUR7 823 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SEL1L3Q68CR1 1132 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TTC27Q6P3X3 843 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 FBXL19Q6PCT2 694 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZC3H14Q6PJT7 736 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 CREG2Q8IUH2 290 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 KLK6Q92876 244 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 NKD2Q969F2 451 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TADA1Q96BN2 335 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 BIRC7Q96CA5 298 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 IMP4Q96G21 291 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 PPP1R16AQ96I34 528 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZC3H10Q96K80 434 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZNF641Q96N77 438 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SLC25A51Q9H1U9 297 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TMEM74BQ9NUR3 256 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 DKK3Q9UBP4 350 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 SMG5Q9UPR3 1016 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ZFR2Q9UPR6 939 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 FADS3Q9Y5Q0 445 aa9.17□□□□□ -0.94
PDE4D-201ENST00000309641 ATXN2Q99700 1313 aaKnown RBP9.17□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3DA0A087WVF3 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3IA0A087WXS9 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3EA0A087X179 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3KA0A087X1G2 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3FA6NER0 549 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3LB9A6J9 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PGRMC1O00264 195 aaKnown RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 WNT9AO14904 365 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 AREL1O15033 823 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 FZD6O60353 706 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 NDUFS2O75306 463 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PMPCBO75439 489 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PGLSO95336 258 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3HP0C7X1 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 CTPS1P17812 591 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PSMB4P28070 264 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 OXTRP30559 389 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PCSK7Q16549 785 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 CCNG2Q16589 344 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 FAXCQ5TGI0 409 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3GQ6DHY5 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3CQ6IPX1 549 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 KDM7AQ6ZMT4 941 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TBC1D3Q8IZP1 549 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 ACTRT1Q8TDG2 376 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 SPATA13Q96N96 652 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TDRD1Q9BXT4 1180 aaKnown RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 SMOC1Q9H4F8 434 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 SGK2Q9HBY8 427 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TTC7AQ9ULT0 858 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-201ENST00000309641 ZNF148Q9UQR1 794 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 SAR1BQ9Y6B6 198 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 SPEGQ15772 3267 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 TRPM6Q9BX84 2022 aa9.16□□□□□ -0.94
PDE4D-201ENST00000309641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 C5orf60A6NFR6 353 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MTSS1O43312 755 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 SOCS5O75159 536 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 FSBPO95073 299 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PCDH8O95206 1070 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 METTL18O95568 372 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 IFNB1P01574 187 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 SERPINF2P08697 491 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ALPIP09923 528 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PRLRP16471 622 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 TCP1P17987 556 aaKnown RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MAPK8P45983 427 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 FGL2Q14314 439 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 GRM3Q14832 879 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 SYCP2LQ5T4T6 812 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 BRAT1Q6PJG6 821 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 SLC36A4Q6YBV0 504 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 LPCAT2Q7L5N7 544 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ASCL5Q7RTU5 278 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 DCLK2Q8N568 766 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PAF1Q8N7H5 531 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 OR2T34Q8NGX1 318 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PIH1D2Q8WWB5 315 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ORAI3Q9BRQ5 295 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms