RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 NEU3Q9UQ49 428 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 TBC1D30Q9Y2I9 924 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 MRPS17Q9Y2R5 130 aaKnown RBP8.38□□□□□ -1.07
CHD6-201ENST00000309279 SNX10Q9Y5X0 201 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 ALG6Q9Y672 507 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 ATG2BQ96BY7 2078 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 NUP205Q92621 2012 aa8.38□□□□□ -1.07
CHD6-201ENST00000309279 WDFY4Q6ZS81 3184 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 K7EQS6 105 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 TRIM24O15164 1050 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 KRT86O43790 486 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 SRGAP2O75044 1071 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 TSC22D2O75157 780 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PALMO75781 387 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CNTN5O94779 1100 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 SLITRK5O94991 958 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 LUC7L3O95232 432 aaKnown RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 KAT7O95251 611 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PDGFBP01127 241 aaPredicted RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 KRT7P08729 469 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 RARAP10276 462 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CHRNB1P11230 501 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 TMEM11P17152 192 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 HLA-FP30511 346 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 GRIA2P42262 883 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 HCAR3P49019 387 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 IRAK1P51617 712 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 ARSEP51690 589 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CLCN6P51797 869 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 ARFIP1P53367 373 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CDH4P55283 916 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PRSS12P56730 875 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 TAS2R40P59535 323 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 DCAF7P61962 342 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 ZBTB16Q05516 673 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 GRSF1Q12849 480 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD6-201ENST00000309279 LBRQ14739 615 aaKnown RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 PON2Q15165 354 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 RCN1Q15293 331 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CA9Q16790 459 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 KCNT1Q5JUK3 1230 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 LRRC38Q5VT99 294 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 ASTLQ6HA08 431 aaPredicted RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 FSTL4Q6MZW2 842 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CCDC81Q6ZN84 652 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 DBX2Q6ZNG2 339 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 CPNE8Q86YQ8 564 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD6-201ENST00000309279 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PCYOX1LQ8NBM8 494 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 OR6C4Q8NGE1 309 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 EZH1Q92800 747 aaPredicted RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 CLDN23Q96B33 292 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 LRGUKQ96M69 825 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 TSGA10Q9BZW7 698 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 ZYG11BQ9C0D3 744 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
CHD6-201ENST00000309279 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PPT2Q9UMR5 302 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 EDARQ9UNE0 448 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 PCDHGB5Q9Y5G0 923 aa8.37□□□□□ -1.07
CHD6-201ENST00000309279 FAM170BA6NMN3 283 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 UBXN8O00124 270 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 BUB1O43683 1085 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RHOQP17081 205 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 COMTP21964 271 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TARSP26639 723 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 ATP5DP30049 168 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TNFRSF4P43489 277 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RPS9P46781 194 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 CLCN5P51795 746 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 PLK1P53350 603 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 SLC12A1Q13621 1099 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 IFI16Q16666 785 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 SMTNL2Q2TAL5 461 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 KBTBD12Q3ZCT8 623 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 FBXO43Q4G163 708 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 FSCBQ5H9T9 825 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 DGKKQ5KSL6 1271 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CWF19L1Q69YN2 538 aaKnown RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 GRAMD4Q6IC98 578 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 RAB12Q6IQ22 244 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 SLC30A6Q6NXT4 461 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 NUDT18Q6ZVK8 323 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC91Q7Z6B0 441 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 GALNT7Q86SF2 657 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 SETD3Q86TU7 594 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 NLRP8Q86W28 1048 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 MFN1Q8IWA4 741 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 TERB1Q8NA31 727 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 CCDC26Q8TAB7 109 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 WFDC5Q8TCV5 224 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 ANKRD7Q92527 254 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
CHD6-201ENST00000309279 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 FOXQ1Q9C009 403 aa8.36□□□□□ -1.07
CHD6-201ENST00000309279 DHX35Q9H5Z1 703 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms