RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 IVDP26440 423 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 AXLP30530 894 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HOXA9P31269 272 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 OR1D2P34982 312 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CETN2P41208 172 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NCALDP61601 193 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 POU5F1BQ06416 359 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PPP3CAQ08209 521 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 GRIK3Q13003 919 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 STRN3Q13033 797 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 RAB33AQ14088 237 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 MESDQ14696 234 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PPP1R7Q15435 360 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CCNG2Q16589 344 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 LPAL2Q16609 132 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PARP6Q2NL67 630 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CMPK2Q5EBM0 449 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HIBCHQ6NVY1 386 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SLC27A1Q6PCB7 646 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 DRICH1Q6PGQ1 229 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM72Q6ZMU5 477 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TPRG1Q6ZUI0 275 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ASRGL1Q7L266 308 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HAUS6Q7Z4H7 955 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SPATA21Q7Z572 469 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ANKS1BQ7Z6G8 1248 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NOP9Q86U38 636 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF19Q8IW93 802 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 FAM26EQ8N5C1 309 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CCDC89Q8N998 374 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 FBXL13Q8NEE6 735 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SLC7A14Q8TBB6 771 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SLC20A1Q8WUM9 679 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 KRT35Q92764 455 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ZNF653Q96CK0 615 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 RSPRY1Q96DX4 576 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 MCRS1Q96EZ8 462 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 MAGEB18Q96M61 343 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ZSWIM3Q96MP5 696 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TTC25Q96NG3 672 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NT5C1BQ96P26 610 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TMEM237Q96Q45 408 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 RAB3IPQ96QF0 476 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PCDHB18PQ96TA0 734 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PRMT1Q99873 361 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ELAC2Q9BQ52 826 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NTPCRQ9BSD7 190 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TTPALQ9BTX7 342 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NUP85Q9BW27 656 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NFKBIZQ9BYH8 718 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 OSBPL6Q9BZF3 934 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CCDC113Q9H0I3 377 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CDC42EP4Q9H3Q1 356 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 FZD8Q9H461 694 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PDZD7Q9H5P4 517 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 POLD4Q9HCU8 107 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HEBP1Q9NRV9 189 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TXLNGQ9NUQ3 528 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SEPT11Q9NVA2 429 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ZSCAN32Q9NX65 697 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 NKIRAS1Q9NYS0 192 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 HSPBP1Q9NZL4 362 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 CTNNAL1Q9UBT7 734 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 FETUBQ9UGM5 382 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TCAF1Q9Y4C2 921 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TESMINQ9Y4I5 508 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 ZFP37Q9Y6Q3 630 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 TNRC6BQ9UPQ9 1833 aaKnown RBP5.04□□□□□ -1.6
CKS1B-201ENST00000308987 KALRNO60229 2985 aa5.04□□□□□ -1.6
CKS1B-201ENST00000308987 SF3B1O75533 1304 aaKnown RBP eCLIP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TRBV23OR9-2A0A075B6M9 112 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TMEM120BA0PK00 339 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ARNTLO00327 626 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TRAFD1O14545 582 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MUSKO15146 869 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TP73O15350 636 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PRPF4O43172 522 aaKnown RBP eCLIP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TBC1D4O60343 1298 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ECI2O75521 394 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PROSCO94903 275 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 LUC7L3O95232 432 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SEC24AO95486 1093 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 VNN2O95498 520 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 RHOP08100 348 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 POU2F2P09086 479 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 UNGP13051 313 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CYP11B1P15538 503 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TSHRP16473 764 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TKTP29401 623 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ALDH3A1P30838 453 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PTPN7P35236 360 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 BRCC3P46736 316 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms