RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 MS4A2Q01362 244 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 PPIL2Q13356 520 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 CELF3Q5SZQ8 465 aaKnown RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 KLHL35Q6PF15 583 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 WDR83Q9BRX9 315 aaKnown RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 ZDHHC7Q9NXF8 308 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SCHIP1Q9P0W5 487 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 BNIP3LO60238 219 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SLC25A27O95847 323 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 MT-CYBP00156 380 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 RHDQ02161 417 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 TIGD2Q4W5G0 525 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 WSCD1Q658N2 575 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 PKN3Q6P5Z2 889 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 RPS27LQ71UM5 84 aaKnown RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 BNIPLQ7Z465 357 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 CENPLQ8N0S6 344 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 MINDY3Q9H8M7 445 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 RAD54BQ9Y620 910 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 LRP5O75197 1615 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 NCK1P16333 377 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 DNAJB2P25686 324 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 CPOXP36551 454 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 GNA12Q03113 381 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 RAD51Q06609 339 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 DMPKQ09013 629 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 DMC1Q14565 340 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SPESP1Q6UW49 350 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 CLYBLQ8N0X4 340 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 SEPT8Q92599 483 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 ZBTB26Q9HCK0 441 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 EXOSC4Q9NPD3 245 aaKnown RBP13.55□□□□□ -0.24
SEC23A-201ENST00000307712 ENTPD7Q9NQZ7 604 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 TRIM17Q9Y577 477 aa13.55□□□□□ -0.24
SEC23A-201ENST00000307712 EI24O14681 340 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CTSHP09668 335 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 PTPN1P18031 435 aaKnown RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 GSSP48637 474 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 BNIP2Q12982 314 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 NAPRTQ6XQN6 538 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 FANCEQ9HB96 536 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CCL22O00626 93 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 KATNA1O75449 491 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CLDN10P78369 228 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 TNK2Q07912 1038 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 HNRNPDQ14103 355 aaKnown RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CARTPTQ16568 116 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 OLFML1Q6UWY5 402 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 APOL5Q9BWW9 433 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 GOLGA2P5Q9HBQ8 144 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 ZNF214Q9UL59 606 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 ZNF682O95780 498 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CDK4P11802 303 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 COL6A2P12110 1019 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 NDUFV1P49821 464 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 MERTKQ12866 999 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 ZRANB3Q5FWF4 1079 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CHST15Q7LFX5 561 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 SPATA2LQ8IUW3 424 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 HPS1Q92902 700 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 CENPNQ96H22 339 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 HAPLN3Q96S86 360 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 COL18A1P39060 1754 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 IRF6O14896 467 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 AZIN1O14977 448 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 SPTLC1O15269 473 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 B3GAT3O94766 335 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 INPP1P49441 399 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 RABGGTBP53611 331 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 MAXP61244 160 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 DACT3Q96B18 629 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-201ENST00000307712 C19orf60Q96EN9 201 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 ZNF696Q9H7X3 374 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 LATS2Q9NRM7 1088 aa13.54□□□□□ -0.24
SEC23A-201ENST00000307712 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms