RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 C5orf42Q9H799 3197 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 CLDN5O00501 218 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 AXIN1O15169 862 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PIGNO95427 931 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ELNP15502 786 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 S100A1P23297 94 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PSME3P61289 254 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 MOGQ16653 247 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PPP1R26Q5T8A7 1209 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 UBE2UQ5VVX9 321 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PDZD8Q8NEN9 1154 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 SIGLEC10Q96LC7 697 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 TXNDC16Q9P2K2 825 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ZDHHC2Q9UIJ5 367 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 TSPAN16Q9UKR8 245 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ARID2Q68CP9 1835 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 GLRA3O75311 464 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 SPAG6O75602 509 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 CHEK2O96017 543 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 CCNA2P20248 432 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 GNL1P36915 607 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 RPS3AP61247 264 aaKnown RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 SELENBP1Q13228 472 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 USP43Q70EL4 1123 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 GATA5Q9BWX5 397 aaPredicted RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 ZNF229Q9UJW7 825 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 PRPF19Q9UMS4 504 aaKnown RBP16.36■□□□□ 0.21
CCDC8-201ENST00000307522 NME7Q9Y5B8 376 aa16.36■□□□□ 0.21
CCDC8-201ENST00000307522 TRIP11Q15643 1979 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 NAGLUP54802 743 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 HADHQ16836 314 aaKnown RBP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 PPP2R2DQ66LE6 453 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 RWDD4Q6NW29 188 aaKnown RBP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 ZNF677Q86XU0 584 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 MAELQ96JY0 434 aaKnown RBP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 FAR2Q96K12 515 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CCDC138Q96M89 665 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CSF3RQ99062 836 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 OMDQ99983 421 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 ADI1Q9BV57 179 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 USP18Q9UMW8 372 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 NOTOA8MTQ0 251 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CLOCKO15516 846 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 PROZP22891 400 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 MGAT1P26572 445 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CAP1Q01518 475 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CRHR2Q13324 411 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 GRB14Q14449 540 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 ZNF484Q5JVG2 852 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 ZNF534Q76KX8 674 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 IFNEQ86WN2 208 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 PGAM4Q8N0Y7 254 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 LRCH3Q96II8 777 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 CNDP1Q96KN2 507 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 EBNA1BP2Q99848 306 aaKnown RBP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 MFHAS1Q9Y4C4 1052 aa16.35■□□□□ 0.21
CCDC8-201ENST00000307522 COPG1Q9Y678 874 aaKnown RBP16.35■□□□□ 0.21
CCDC8-201ENST00000307522 SCN1AP35498 2009 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 FAM159BA6NKW6 160 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 GLDCP23378 1020 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 ARPC4P59998 168 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 YBX1P67809 324 aaKnown RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 ARL13AQ5H913 290 aaPredicted RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TFAP2CQ92754 450 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 WNT8BQ93098 351 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 AGAP2Q99490 1192 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 PIF1Q9H611 641 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 EFCAB1Q9HAE3 211 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TUBA8Q9NY65 449 aaPredicted RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 PRPSAP1Q14558 356 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 MFSD10Q14728 455 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 INAQ16352 499 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 ANKRD60Q9BZ19 345 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 NANOGQ9H9S0 305 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 GNPTGQ9UJJ9 305 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 CDY1Q9Y6F8 540 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TCAF2A6NFQ2 919 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 PMM2O15305 246 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 IL18RAPO95256 599 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 CALB1P05937 261 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 SPCS2Q15005 226 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 STILQ15468 1287 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 FAM214AQ32MH5 1076 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 OTUD3Q5T2D3 398 aaPredicted RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 SREK1Q8WXA9 508 aaKnown RBP16.34■□□□□ 0.21
CCDC8-201ENST00000307522 TMEM176AQ96HP8 235 aa16.34■□□□□ 0.21
CCDC8-201ENST00000307522 GLT1D1Q96MS3 346 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms