RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TXNDC8Q6A555 127 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CHST9Q7L1S5 443 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PTAR1Q7Z6K3 402 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 LDB1Q86U70 411 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CILP2Q8IUL8 1156 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PPP1R14CQ8TAE6 165 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PIWIL2Q8TC59 973 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 HDAC10Q969S8 669 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 NXNL1Q96CM4 212 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 EXOC2Q96KP1 924 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 SMIM14Q96QK8 99 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 NDNQ99608 321 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OLFM1Q99784 485 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ARMCX1Q9P291 453 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 RUVBL2Q9Y230 463 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 ANKRD6Q9Y2G4 727 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 A0A1B0GVM2 712 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TCAF2A6NFQ2 919 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 A8MUI8 341 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TRAFD1O14545 582 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 SLC7A4O43246 635 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 FGF18O76093 207 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OLFM2O95897 454 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PRLP01236 227 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 EPOP01588 193 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 RHOCP08134 193 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 MBL2P11226 248 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 GLRBP48167 497 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PPP3CCP48454 512 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CD151P48509 253 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OXCT1P55809 520 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ABCE1P61221 599 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 SMAD3P84022 425 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 ARF5P84085 180 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ACVR1Q04771 509 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 SLC12A1Q13621 1099 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 VEPH1Q14D04 833 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 KIAA0408Q6ZU52 694 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 GAREM2Q75VX8 874 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 SETD3Q86TU7 594 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 PARP9Q8IXQ6 854 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 FSTL5Q8N475 847 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.59□□□□□ -1.35
USP47-201ENST00000305481 ARL14EPQ8N8R7 260 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 STYXQ8WUJ0 223 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 YME1L1Q96TA2 773 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 UNKQ9C0B0 810 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 TASP1Q9H6P5 420 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TLK1Q9UKI8 766 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CAPN14A8MX76 684 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CBX4O00257 560 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TGM5O43548 720 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ZMPSTE24O75844 475 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ATP5HO75947 161 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 S1PR4O95977 384 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 SERPINF2P08697 491 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 STMN1P16949 149 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ELF1P32519 619 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 POLD2P49005 469 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 EPHB3P54753 998 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 LINGO4Q6UY18 593 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ZYG11AQ6WRX3 759 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 Q6ZNB5 142 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 WFDC5Q8TCV5 224 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 BLOC1S5Q8TDH9 187 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 INPP5DQ92835 1189 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 IFT43Q96FT9 208 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ELMO2Q96JJ3 720 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 DNAJC1Q96KC8 554 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 TBATAQ96M53 351 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 MIPEPQ99797 713 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 ZBP1Q9H171 429 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 MFSD1Q9H3U5 465 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 TRPC7Q9HCX4 862 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 LNPEPQ9UIQ6 1025 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 MTF2Q9Y483 593 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OR51B4Q9Y5P0 310 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OBSL1O75147 1896 aa6.59□□□□□ -1.36
USP47-201ENST00000305481 SNAP91O60641 907 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TRIM13O60858 407 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 C1RP00736 705 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 FGF1P05230 155 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 PDHA1P08559 390 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 COL6A2P12110 1019 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms