RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 LRRC40Q9H9A6 602 aa27.36■■□□□ 1.97
HDAC3-201ENST00000305264 EIF2B3Q9NR50 452 aaKnown RBP27.36■■□□□ 1.97
HDAC3-201ENST00000305264 TPX2Q9ULW0 747 aaKnown RBP27.36■■□□□ 1.97
HDAC3-201ENST00000305264 PLK4O00444 970 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 MAGEA6P43360 314 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 CHRNA4P43681 627 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 GALNT3Q14435 633 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 ARMC12Q5T9G4 340 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 TSTD1Q8NFU3 115 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 IFT43Q96FT9 208 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 FEM1CQ96JP0 617 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 ERI2A8K979 691 aaKnown RBP27.35■■□□□ 1.97
HDAC3-201ENST00000305264 TP73O15350 636 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 CA4P22748 312 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 ITGB7P26010 798 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 SLC8A1P32418 973 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 CFAP58Q5T655 872 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 PARS2Q7L3T8 475 aaKnown RBP27.35■■□□□ 1.97
HDAC3-201ENST00000305264 TMEM105Q8N8V8 129 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 TBL1YQ9BQ87 522 aa27.35■■□□□ 1.97
HDAC3-201ENST00000305264 LOC285095A0A1B0GVY8 99 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 ADH1BP00325 375 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 TPSB2P20231 275 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 GRIA1P42261 906 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 TPSAB1Q15661 275 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 LRRC73Q5JTD7 316 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 FAM46CQ5VWP2 391 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 ANO7Q6IWH7 933 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 PPIL6Q8IXY8 311 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 AADATQ8N5Z0 425 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 PAF1Q8N7H5 531 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 NAT8LQ8N9F0 302 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 LPCAT1Q8NF37 534 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 SIPA1Q96FS4 1042 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 GRHL1Q9NZI5 618 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 CACNA1IQ9P0X4 2223 aa27.34■■□□□ 1.97
HDAC3-201ENST00000305264 TSPAN11A1L157 253 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 C16orf96A6NNT2 1141 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 BHMG1C9JSJ3 638 aaPredicted RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SUN1O94901 812 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 CPP00450 1065 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 ATXN1LP0C7T5 689 aaKnown RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 ITGA8P53708 1063 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 CCDC70Q6NSX1 233 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 KIAA1324Q6UXG2 1013 aaKnown RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SLC25A41Q8N5S1 370 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 MDGA1Q8NFP4 955 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SEC14L1Q92503 715 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PRCCQ92733 491 aaPredicted RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PPP1R16AQ96I34 528 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SMIM14Q96QK8 99 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PIH1D1Q9NWS0 290 aaKnown RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 DKK3Q9UBP4 350 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SERGEFQ9UGK8 458 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 ARIH1Q9Y4X5 557 aaPredicted RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 V9GYY5 206 aaPredicted RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PSMD3O43242 534 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 C7P10643 843 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 DRD3P35462 400 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SLC1A5Q15758 541 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 BRAT1Q6PJG6 821 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 RANBP10Q6VN20 620 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PIH1D2Q8WWB5 315 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 PABPC3Q9H361 631 aaKnown RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 EPB41L5Q9HCM4 733 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 CD93Q9NPY3 652 aa27.33■■□□□ 1.97
HDAC3-201ENST00000305264 SPATA6Q9NWH7 488 aaPredicted RBP27.33■■□□□ 1.97
HDAC3-201ENST00000305264 GOLGA8MH3BSY2 632 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 NDST3O95803 873 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 DNTTP04053 509 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 PRKCGP05129 697 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 C5AR1P21730 350 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 CXCL12P48061 93 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 SIRPB2Q5JXA9 342 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 HIBCHQ6NVY1 386 aaPredicted RBP27.32■■□□□ 1.96
HDAC3-201ENST00000305264 ZNF534Q76KX8 674 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 SPOCK2Q92563 424 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 EPC1Q9H2F5 836 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 BCCIPQ9P287 314 aaKnown RBP eCLIP27.32■■□□□ 1.96
HDAC3-201ENST00000305264 MYLKQ15746 1914 aa27.32■■□□□ 1.96
HDAC3-201ENST00000305264 FAM86C2PA6NEL3 165 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 CCR3P51677 355 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 CNTN1Q12860 1018 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 PTPRRQ15256 657 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 NAPEPLDQ6IQ20 393 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 DENND5AQ6IQ26 1287 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 BMP8AQ7Z5Y6 402 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 PCGF5Q86SE9 256 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 FBXL6Q8N531 539 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 DYRK4Q9NR20 520 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 WHRNQ9P202 907 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 A0A1W2PP55 124 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 EPOP01588 193 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 PGBD3Q8N328 593 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 OR52K1Q8NGK4 314 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 RMDN1Q96DB5 314 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 ADGRE3Q9BY15 652 aa27.31■■□□□ 1.96
HDAC3-201ENST00000305264 TIMP2P16035 220 aa27.3■■□□□ 1.96
HDAC3-201ENST00000305264 P2RY2P41231 377 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms