RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 EPS8L3Q8TE67 593 aaKnown RBP5.28□□□□□ -1.56
SCN1A-201ENST00000303395 CYP2S1Q96SQ9 504 aa5.28□□□□□ -1.56
SCN1A-201ENST00000303395 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
SCN1A-201ENST00000303395 KCNH7Q9NS40 1196 aa5.28□□□□□ -1.56
SCN1A-201ENST00000303395 TAS2R7Q9NYW3 318 aa5.28□□□□□ -1.56
SCN1A-201ENST00000303395 CRYBG1Q9Y4K1 1723 aa5.28□□□□□ -1.56
SCN1A-201ENST00000303395 WASH4PA8MWX3 477 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 RAD51BO15315 384 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ALAS1P13196 640 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 EFNA1P20827 205 aaPredicted RBP5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ACO1P21399 889 aaKnown RBP5.27□□□□□ -1.56
SCN1A-201ENST00000303395 CXCR2P25025 360 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 CHRNA5P30532 468 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 RPL21P46778 160 aaKnown RBP5.27□□□□□ -1.56
SCN1A-201ENST00000303395 NDST1P52848 882 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 GPSM2P81274 684 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 GIT2Q14161 759 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 USP10Q14694 798 aaKnown RBP5.27□□□□□ -1.56
SCN1A-201ENST00000303395 NR1D2Q14995 579 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ATP6AP1LQ52LC2 224 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ARHGAP15Q53QZ3 475 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 CCSAPQ6IQ19 270 aaPredicted RBP5.27□□□□□ -1.56
SCN1A-201ENST00000303395 USP43Q70EL4 1123 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 RNF135Q8IUD6 432 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ZZZ3Q8IYH5 903 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 ATP13A1Q9HD20 1204 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 FAIMQ9NVQ4 179 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 CYB5R1Q9UHQ9 305 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 SIX4Q9UIU6 781 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 SNX7Q9UNH6 387 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 PTCH2Q9Y6C5 1203 aa5.27□□□□□ -1.56
SCN1A-201ENST00000303395 EIF3FO00303 357 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 NCK2O43639 380 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 AKAP8O43823 692 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HBP1O60381 514 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 STAU1O95793 577 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HIST1H2ABP04908 130 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 RFX3P48380 749 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CXCR4P61073 352 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 DGKKQ5KSL6 1271 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CDCA2Q69YH5 1023 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM26Q6ZUK4 368 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HIST3H2AQ7L7L0 130 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HEATR4Q86WZ0 1026 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ZC3H7AQ8IWR0 971 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 LRRC52Q8N7C0 313 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 DENND6BQ8NEG7 585 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ACTL9Q8TC94 416 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TCP10LQ8TDR4 215 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 EPS8L1Q8TE68 723 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 UCMAQ8WVF2 138 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 DNAJB3Q8WWF6 145 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 NCSTNQ92542 709 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HIST1H2ACQ93077 130 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 NUAK2Q9H093 628 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 KIAA1683Q9H0B3 1180 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 KAT8Q9H7Z6 458 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF302Q9NR11 478 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TSR3Q9UJK0 312 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 SLC39A10Q9ULF5 831 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 IRAK3Q9Y616 596 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 C2orf81A6NN90 581 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 FOXO6A8MYZ6 492 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 LRIG2O94898 1065 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 NUDT14O95848 222 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 BMP1P13497 986 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ENO3P13929 434 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 MYL12AP19105 171 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 PDHA2P29803 388 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CDKL4Q5MAI5 379 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 SLX4IPQ5VYV7 408 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HGSNATQ68CP4 663 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CERS6Q6ZMG9 384 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ANKRD23Q86SG2 305 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ILDR1Q86SU0 546 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 FAM118BQ9BPY3 351 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 PUS3Q9BZE2 481 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TIAM2Q8IVF5 1701 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 FAM237BA0A1B0GVD1 139 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TRAPPC13A5PLN9 417 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ANKRD33BA6NCL7 494 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 HOXA2O43364 376 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 LYPLA1O75608 230 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 PDHBP11177 359 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ITGALP20701 1170 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 EPHB2P29323 1055 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 GRK4P32298 578 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 GMPRP36959 345 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ADGRE1Q14246 886 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ATP13A4Q4VNC1 1196 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 PCID2Q5JVF3 399 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ANXA8L1Q5VT79 327 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 TWF2Q6IBS0 349 aaKnown RBP5.27□□□□□ -1.57
SCN1A-201ENST00000303395 SIX5Q8N196 739 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CCNYL1Q8N7R7 359 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 ZHX1-C8orf76Q96EF9 292 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 NUDT12Q9BQG2 462 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 AIFM2Q9BRQ8 373 aa5.27□□□□□ -1.57
SCN1A-201ENST00000303395 CCNL1Q9UK58 526 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms