RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SLC35C2Q9NQQ7 365 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 NINJ2Q9NZG7 142 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SUCOQ9UBS9 1254 aaKnown RBP7.85□□□□□ -1.15
SCN9A-201ENST00000303354 EFR3BQ9Y2G0 817 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SLC27A6Q9Y2P4 619 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 LRRIQ1Q96JM4 1722 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SPATA31C2B4DYI2 1134 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 C9JVG2 144 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 PLGLB1Q02325 96 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SLC44A4Q53GD3 710 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SLC25A24Q6NUK1 477 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 HJURPQ8NCD3 748 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-201ENST00000303354 NPLOC4Q8TAT6 608 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 LENG9Q96B70 501 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 UNC93B1Q9H1C4 597 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 NMRAL1Q9HBL8 299 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 SGK2Q9HBY8 427 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 COMMD8Q9NX08 183 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 PLAGL1Q9UM63 463 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 NRP1O14786 923 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 LGR5O75473 907 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 RPL22P35268 128 aaKnown RBP7.85□□□□□ -1.15
SCN9A-201ENST00000303354 HPCAL1P37235 193 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 IFI35P80217 286 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-201ENST00000303354 PROSER1Q86XN7 944 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 NAT14Q8WUY8 206 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 PROX1Q92786 737 aa7.85□□□□□ -1.15
SCN9A-201ENST00000303354 RIC1Q4ADV7 1423 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 WNT7AO00755 349 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 AP3D1O14617 1153 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 PTNP21246 168 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 FSHRP23945 695 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CDC25CP30307 473 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 LSM3P62310 102 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 KBTBD12Q3ZCT8 623 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 LRRC8BQ6P9F7 803 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 PPTC7Q8NI37 304 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CLEC4CQ8WTT0 213 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 FGFBP2Q9BYJ0 223 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DCXO43602 365 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 HCRTO43612 131 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CATP04040 527 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 KRT16P08779 473 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CAP1Q01518 475 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DSC2Q02487 901 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CRTC1Q6UUV9 634 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 METTL21AQ8WXB1 218 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 HAS1Q92839 578 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MYO19Q96H55 970 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 COQ7Q99807 217 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DNAJC18Q9H819 358 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 UBIAD1Q9Y5Z9 338 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 RAD54BQ9Y620 910 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MADDQ8WXG6 1647 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TCEA3O75764 348 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MAPK11Q15759 364 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 NRF1Q16656 503 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 SLC24A5Q71RS6 500 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 STK32CQ86UX6 486 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CYP4Z2PQ8N1L4 340 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 C5orf34Q96MH7 638 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MECRQ9BV79 373 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TTLL2Q9BWV7 592 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MRPS5P82675 430 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 NEDD8Q15843 81 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 C9orf64Q5T6V5 341 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TXNDC8Q6A555 127 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 ZPBP2Q6X784 338 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM132CQ8N3T6 1108 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 FAM98AQ8NCA5 519 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 SCAMP5Q8TAC9 235 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 BADQ92934 168 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CCDC134Q9H6E4 229 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 MCCC2Q9HCC0 563 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 COL20A1Q9P218 1284 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 RPTORQ8N122 1335 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 NRXN1Q9ULB1 1477 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 SPAG6O75602 509 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 EPN2O95208 641 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 BMP10O95393 424 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 PRKCHP24723 683 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 YAP1P46937 504 aaKnown RBP7.84□□□□□ -1.15
SCN9A-201ENST00000303354 PCYT1AP49585 367 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CASP7P55210 303 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM119Q4V9L6 283 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM161BQ8NDZ6 487 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DPYSL5Q9BPU6 564 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 EBPLQ9BY08 206 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 LRRC72A6NJI9 287 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF839A8K0R7 811 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TFEBP19484 476 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 CYP3A5P20815 502 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 TERF2Q15554 542 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 NEK10Q6ZWH5 1172 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 DENND6AQ8IWF6 608 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 SPATA22Q8NHS9 363 aa7.84□□□□□ -1.15
SCN9A-201ENST00000303354 BSNDQ8WZ55 320 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms