RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TFRCP02786 760 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 FGFR1P11362 822 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TPSB2P20231 275 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PBLDP30039 288 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CDK9P50750 372 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 MARSP56192 900 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 BST1Q10588 318 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TPSAB1Q15661 275 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SLCO6A1Q86UG4 719 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NACC2Q96BF6 587 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ROPN1LQ96C74 230 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SETD4Q9NVD3 440 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 FKBP14Q9NWM8 211 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NAV1Q8NEY1 1877 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 MATN2O00339 956 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 EDF1O60869 148 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ORC1Q13415 861 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 HLA-DQA1Q5Y7H0 255 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GATAD2AQ86YP4 633 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 HIPK1Q86Z02 1210 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CNTD1Q8N815 330 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TRPV3Q8NET8 790 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GIPC3Q8TF64 312 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 HEXDCQ8WVB3 486 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NFKBIZQ9BYH8 718 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 DDX43Q9NXZ2 648 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PLLPQ9Y342 182 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 JCADQ9P266 1359 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TRMUO75648 421 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 IFNGP01579 166 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 FGF1P05230 155 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ERCC2P18074 760 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PSMB4P28070 264 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 UGT1A5P35504 534 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GJA8P48165 433 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 DLG1Q12959 904 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SKIV2LQ15477 1246 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 VPS35Q96QK1 796 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PORCNQ9H237 461 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 THG1LQ9NWX6 298 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CLIC5Q9NZA1 410 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SAMHD1Q9Y3Z3 626 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 A0A1W2PRG6 482 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 DHFRP00374 187 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TAF13Q15543 124 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 KCTD21Q4G0X4 260 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GNASQ5JWF2 1037 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 METTL21CQ5VZV1 264 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PRR23BQ6ZRT6 265 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SLC30A8Q8IWU4 369 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NDNQ99608 321 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 MAF1Q9H063 256 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GALNT8Q9NY28 637 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ZMYM5Q9UJ78 669 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 COG5Q9UP83 839 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 hCG_1818297A0A087WSY0 165 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF37AP17032 561 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 FMO4P31512 558 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 RARRES1P49788 294 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TMPRSS11AQ6ZMR5 421 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ZCCHC23Q6ZST2 131 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 C12orf50Q8NA57 414 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 POMGNT2Q8NAT1 580 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TMEM109Q9BVC6 243 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF180Q9UJW8 692 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PEX16Q9Y5Y5 336 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MICAL3Q7RTP6 2002 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SPATA31A1Q5TZJ5 1347 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MDM4O15151 490 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 GRM3Q14832 879 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 DNAJC14Q6Y2X3 702 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PGAM4Q8N0Y7 254 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 WDR48Q8TAF3 677 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CDH22Q9UJ99 828 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 PARNO95453 639 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 FTH1P02794 183 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 CATP04040 527 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.181e-7■■□□□ 12.4
SF3B3-201ENST00000302516 RFX3P48380 749 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SLC25A3Q00325 362 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 GRIK4Q16099 956 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SETMARQ53H47 684 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 RAB2BQ8WUD1 216 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 C2orf49Q9BVC5 232 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TRMT13Q9NUP7 481 aaKnown RBP7.68□□□□□ -1.18
SF3B3-201ENST00000302516 MKL2Q9ULH7 1088 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 NFASCO94856 1347 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 TCRBV9S1A1TA0A576 114 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 SLITRK3O94933 977 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 HGFP14210 728 aa7.68□□□□□ -1.18
SF3B3-201ENST00000302516 RPL9P32969 192 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms