RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SIM1P81133 766 aaPredicted RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 IL9RQ01113 521 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 BNIP3Q12983 259 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 HNRNPDQ14103 355 aaKnown RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 FZD2Q14332 565 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 TRIP6Q15654 476 aaKnown RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 UGP2Q16851 508 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 SLC9A4Q6AI14 798 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 PRPF39Q86UA1 669 aaKnown RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 VSIG1Q86XK7 387 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 CAMK1DQ8IU85 385 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 RFFLQ8WZ73 363 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 ZNF641Q96N77 438 aaPredicted RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 OLFM3Q96PB7 478 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 TSGA13Q96PP4 275 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 SUV39H2Q9H5I1 410 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 MBNL1Q9NR56 388 aaKnown RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 NBEAQ8NFP9 2946 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 RP1P56715 2156 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 SPTY2D1-AS1A0A0U1RR47 76 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 AKR1B15C9JRZ8 316 aaPredicted RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 PAK4O96013 591 aaPredicted RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 ATXN1LP0C7T5 689 aaKnown RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 SPINK2P20155 84 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 GARSP41250 739 aaKnown RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 DNA2P51530 1060 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 CDH6P55285 790 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 GBE1Q04446 702 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 ANKRD20A8PQ5CZ79 823 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 TMCO4Q5TGY1 634 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 KCTD16Q68DU8 428 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 TMCO3Q6UWJ1 677 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 SRLQ86TD4 932 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 GATAD2AQ86YP4 633 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 PELI3Q8N2H9 469 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 CTNNBL1Q8WYA6 563 aaPredicted RBP11.36□□□□□ -0.59
CLCC1-201ENST00000302500 IFT43Q96FT9 208 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 PCDH12Q9NPG4 1184 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 GDF3Q9NR23 364 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 AASDHPPTQ9NRN7 309 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 KLHL11Q9NVR0 708 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 DTLQ9NZJ0 730 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 KLK13Q9UKR3 277 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 ANGPTL2Q9UKU9 493 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 TFR2Q9UP52 801 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 PPIL1Q9Y3C6 166 aa11.36□□□□□ -0.59
CLCC1-201ENST00000302500 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 HYAL3O43820 417 aaPredicted RBP11.35□□□□□ -0.59
CLCC1-201ENST00000302500 PALMO75781 387 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 PRLP01236 227 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 THEGLP0DJG4 465 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 KDELR1P24390 212 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ARL4AP40617 200 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 GRK6P43250 576 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 SUOXP51687 545 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ADCY2Q08462 1091 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 TRAF2Q12933 501 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 EIF2B5Q13144 721 aaKnown RBP11.35□□□□□ -0.59
CLCC1-201ENST00000302500 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 GRM3Q14832 879 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 PDK2Q15119 407 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 WSCD2Q2TBF2 565 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 BRAT1Q6PJG6 821 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ARRDC2Q8TBH0 407 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 RNF157Q96PX1 679 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
CLCC1-201ENST00000302500 NUDCD1Q96RS6 583 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 SCNM1Q9BWG6 230 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 SLC32A1Q9H598 525 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 UCKL1Q9NWZ5 548 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 CTTNBP2NLQ9P2B4 639 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 NEUROG3Q9Y4Z2 214 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ARHGEF17Q96PE2 2063 aaPredicted RBP11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ACACAQ13085 2346 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 DFFAO00273 331 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 TRIM38O00635 465 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 YKT6O15498 198 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 MMP20O60882 483 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 PCDH8O95206 1070 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 MMP2P08253 660 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 C6P13671 934 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 NME1P15531 152 aaKnown RBP11.35□□□□□ -0.59
CLCC1-201ENST00000302500 DESP17661 470 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 LHCGRP22888 699 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 DGKAP23743 735 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 ACADVLP49748 655 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 AP1S1P61966 158 aa11.35□□□□□ -0.59
CLCC1-201ENST00000302500 CCDC15Q0P6D6 951 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms