RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 POM121L1PQ3SYA9 428 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ZNF805Q5CZA5 627 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 KDELC2Q7Z4H8 507 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 TMPRSS6Q8IU80 811 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 GRIN3AQ8TCU5 1115 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 OR8D1Q8WZ84 308 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ART4Q93070 314 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 EID2BQ96D98 161 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 FEM1CQ96JP0 617 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 APOL2Q9BQE5 337 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 FERMT1Q9BQL6 677 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 RHOXF2Q9BQY4 288 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 DPH5Q9H2P9 285 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 CASS4Q9NQ75 786 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 EIF2B3Q9NR50 452 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 DKK3Q9UBP4 350 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ASIC3Q9UHC3 531 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 TPX2Q9ULW0 747 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 AAR2Q9Y312 384 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ANKRD36A6QL64 1941 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 C16orf96A6NNT2 1141 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 STK25O00506 426 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 MID1O15344 667 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 SYNCRIPO60506 623 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 AVILO75366 819 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PAPSS2O95340 614 aaPredicted RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 PRKCGP05129 697 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 MYBL2P10244 700 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ABL2P42684 1182 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 MAPK8P45983 427 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 CARSP49589 748 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 GEMP55040 296 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 BASP1P80723 227 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 GUCY2DQ02846 1103 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 CST6Q15828 149 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PCSK7Q16549 785 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 SIRPB2Q5JXA9 342 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 FNBP1LQ5T0N5 605 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PIP5KL1Q5T9C9 394 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 IZUMO3Q5VZ72 239 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 SDE2Q6IQ49 451 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PARS2Q7L3T8 475 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 RASSF3Q86WH2 238 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PPIL6Q8IXY8 311 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 CBARPQ8N350 705 aaPredicted RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 RYBPQ8N488 228 aaPredicted RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 MCUQ8NE86 351 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 MDGA1Q8NFP4 955 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 IPMKQ8NFU5 416 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 CCHCR1Q8TD31 782 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 HCAR2Q8TDS4 363 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 SNF8Q96H20 258 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 FICDQ9BVA6 458 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 ATP13A3Q9H7F0 1226 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 PIH1D1Q9NWS0 290 aaKnown RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 WHRNQ9P202 907 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.56□□□□□ -0.88
RFX3-201ENST00000302303 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 SPO11Q9Y5K1 396 aa9.56□□□□□ -0.88
RFX3-201ENST00000302303 V9GYY5 206 aaPredicted RBP9.56□□□□□ -0.88
RFX3-201ENST00000302303 TCRBV21S2A2A0A5A6 115 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 ERI2A8K979 691 aaKnown RBP9.55□□□□□ -0.88
RFX3-201ENST00000302303 ANKRD66B4E2M5 251 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 AREL1O15033 823 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 ATG13O75143 517 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 NEBLO76041 1014 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 SLC34A2O95436 690 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 NDST3O95803 873 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 IL1BP01584 269 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 PRNPP04156 253 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 ITGB7P26010 798 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 SERPINA4P29622 427 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 ACTN2P35609 894 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 P2RY2P41231 377 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 RECQLP46063 649 aaPredicted RBP9.55□□□□□ -0.88
RFX3-201ENST00000302303 DGKEP52429 567 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 CDK16Q00536 496 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 DMWDQ09019 674 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 CNTN1Q12860 1018 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 GALNT3Q14435 633 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 GRM3Q14832 879 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 MORF4L2Q15014 288 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 UGP2Q16851 508 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 LRRC73Q5JTD7 316 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 TEX35Q5T0J7 233 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 HOOK3Q86VS8 718 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 OR52K1Q8NGK4 314 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 FBXO25Q8TCJ0 367 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 HHIPQ96QV1 700 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 MCCC1Q96RQ3 725 aaPredicted RBP9.55□□□□□ -0.88
RFX3-201ENST00000302303 TBL1YQ9BQ87 522 aa9.55□□□□□ -0.88
RFX3-201ENST00000302303 OSBPL1AQ9BXW6 950 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms