RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TRIP4Q15650 581 aaPredicted RBP22.12■■□□□ 1.13
TPM4-201ENST00000300933 CNSTQ6PJW8 725 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 RNF135Q8IUD6 432 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 WDR75Q8IWA0 830 aaKnown RBP22.12■■□□□ 1.13
TPM4-201ENST00000300933 POU5F2Q8N7G0 328 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 HIPK4Q8NE63 616 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 OR52K2Q8NGK3 314 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 SEPT8Q92599 483 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 ITFG2Q969R8 447 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 TTPALQ9BTX7 342 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.12■■□□□ 1.133e-6■■■■■ 31.9
TPM4-201ENST00000300933 ENTPD7Q9NQZ7 604 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 PHF24Q9UPV7 400 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 CDH23Q9H251 3354 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 MUSKO15146 869 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 MMP2P08253 660 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 SLC35E2BP0CK96 405 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 GRIA2P42262 883 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 RENBPP51606 427 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 BFSP2Q13515 415 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 INSCQ1MX18 579 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 STXBP5Q5T5C0 1151 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 KDELC1Q6UW63 502 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 PTAR1Q7Z6K3 402 aaPredicted RBP22.11■■□□□ 1.13
TPM4-201ENST00000300933 CLEC14AQ86T13 490 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 FBXO22Q8NEZ5 403 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 OR6Y1Q8NGX8 325 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 NMD3Q96D46 503 aaKnown RBP22.11■■□□□ 1.13
TPM4-201ENST00000300933 GPR22Q99680 433 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 NACA2Q9H009 215 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 TMEM248Q9NWD8 314 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 IL37Q9NZH6 218 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 PSMD3O43242 534 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 SORBS2O94875 1100 aaKnown RBP22.11■■□□□ 1.13
TPM4-201ENST00000300933 OR6B1O95007 311 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 SLC25A3Q00325 362 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 ANO4Q32M45 955 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 SFT2D3Q587I9 215 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 FAM219BQ5XKK7 198 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 SATL1Q86VE3 508 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 LGI2Q8N0V4 545 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 ELMO2Q96JJ3 720 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 ZNF512Q96ME7 567 aaPredicted RBP22.11■■□□□ 1.13
TPM4-201ENST00000300933 RHOJQ9H4E5 214 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 GKN1Q9NS71 199 aa22.11■■□□□ 1.13
TPM4-201ENST00000300933 UXTQ9UBK9 157 aaPredicted RBP22.11■■□□□ 1.13
TPM4-201ENST00000300933 RAMP2O60895 175 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 SBK3P0C264 359 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 HNRNPDQ14103 355 aaKnown RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 RBM20Q5T481 1227 aaKnown RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 PPP4R1Q8TF05 950 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 NXNL1Q96CM4 212 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 SLC25A51Q9H1U9 297 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 SUDS3Q9H7L9 328 aaPredicted RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 CLIC5Q9NZA1 410 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 SLC38A8A6NNN8 435 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 TXNDC9O14530 226 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 SLC6A4P31645 630 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 CSE1LP55060 971 aaKnown RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 DLG1Q12959 904 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 NPAS4Q8IUM7 802 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 RAB3IL1Q8TBN0 382 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 NCSTNQ92542 709 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 ISL2Q96A47 359 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 DTNBP1Q96EV8 351 aa22.1■■□□□ 1.13
TPM4-201ENST00000300933 IMP4Q96G21 291 aaKnown RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 ACE2Q9BYF1 805 aaPredicted RBP22.1■■□□□ 1.13
TPM4-201ENST00000300933 FAM95CA0A1B0GW59 222 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 FAM92AA1XBS5 289 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 HSPA4LO95757 839 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 MPOP05164 745 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 GLDCP23378 1020 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 TAS2R39P59534 338 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 RPS24P62847 133 aaKnown RBP22.09■■□□□ 1.13
TPM4-201ENST00000300933 ASPHQ12797 758 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 LSAMPQ13449 338 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 PEX6Q13608 980 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 CCDC153Q494R4 210 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 CENPLQ8N0S6 344 aaPredicted RBP22.09■■□□□ 1.13
TPM4-201ENST00000300933 SLC26A7Q8TE54 656 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 EXOC2Q96KP1 924 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 GATA5Q9BWX5 397 aaPredicted RBP22.09■■□□□ 1.13
TPM4-201ENST00000300933 CD1EP15812 388 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 VEGFBP49765 207 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 ARSDP51689 593 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 EPHB1P54762 984 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 MED21Q13503 144 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 TUBB3Q13509 450 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 POTEHQ6S545 545 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 KLHDC8BQ8IXV7 354 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 FSTL5Q8N475 847 aaPredicted RBP22.09■■□□□ 1.13
TPM4-201ENST00000300933 TMEM151AQ8N4L1 468 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 OR7D4Q8NG98 312 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 OR6P1Q8NGX9 317 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 SPPL2BQ8TCT7 592 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 CCDC124Q96CT7 223 aaKnown RBP22.09■■□□□ 1.13
TPM4-201ENST00000300933 SEMA3CQ99985 751 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 SPON2Q9BUD6 331 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 C1QTNF1Q9BXJ1 281 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms