RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 MILR1Q7Z6M3 343 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 OR2L8Q8NGY9 312 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 GRIN3AQ8TCU5 1115 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 HTR3CQ8WXA8 447 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SLC25A23Q9BV35 468 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ATG10Q9H0Y0 220 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 AGO4Q9HCK5 861 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 ATP13A1Q9HD20 1204 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 TP73O15350 636 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SASH3O75995 380 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 HTR1BP28222 390 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 MAPK8P45983 427 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 OAZ1P54368 228 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 FAM187BQ17R55 369 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 TPGS1Q6ZTW0 290 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ZDHHC13Q8IUH4 622 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 NEXMIFQ5QGS0 1516 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 PGRMC2O15173 223 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SRCP12931 536 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ACTR3P61158 418 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 DLG3Q92796 817 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 TP53INP1Q96A56 240 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SPATA5L1Q9BVQ7 753 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 NDUFV1P49821 464 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 BCL2L1Q07817 233 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SLC27A1Q6PCB7 646 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 BHLHB9Q6PI77 547 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 TAS1R3Q7RTX0 852 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 RNF145Q96MT1 663 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 CNTNAP2Q9UHC6 1331 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 IL1BP01584 269 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 PTX3P26022 381 aaPredicted RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 TTKP33981 857 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 ITGB3BPQ13352 177 aaPredicted RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 LPCAT1Q8NF37 534 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 TAS1R2Q8TE23 839 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 LOC102724159A0A0B4J2E5 919 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 QSOX1O00391 747 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 ASMTP46597 345 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 IDH2P48735 452 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 PWP2Q15269 919 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCF11-201ENST00000298281 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 PARPBPQ9NWS1 579 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 CIDEBQ9UHD4 219 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 CXCL11O14625 94 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 HAT1O14929 419 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 CATP04040 527 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 SLC9A4Q6AI14 798 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 FAM124AQ86V42 546 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 ADHFE1Q8IWW8 467 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 ATXN2LQ8WWM7 1075 aaKnown RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 ME2P23368 584 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 QPRTQ15274 297 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 ATP13A5Q4VNC0 1218 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 RAET1GQ6H3X3 334 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 STK32CQ86UX6 486 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SLC47A2Q86VL8 602 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 APOPT1Q96IL0 206 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 TSPAN16Q9UKR8 245 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 PLEKP08567 350 aaPredicted RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 S100A3P33764 101 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 BNIP1Q12981 228 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 TEX47Q8TBZ9 253 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
PCF11-201ENST00000298281 ZNF226Q9NYT6 803 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 OPTCQ9UBM4 332 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
PCF11-201ENST00000298281 NTRK1P04629 796 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SERPINA4P29622 427 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 TUBP50607 506 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 GPR135Q8IZ08 494 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 NKX2-3Q8TAU0 364 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 CLOCKO15516 846 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 HMGCRP04035 888 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 PRKAR1AP10644 381 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 DGKAP23743 735 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms