RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 CNGA3Q16281 694 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PARP15Q460N3 678 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MMEL1Q495T6 779 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SPATS1Q496A3 300 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ARHGAP36Q6ZRI8 547 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SCD5Q86SK9 330 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DENND6AQ8IWF6 608 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GALNT15Q8N3T1 639 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MARVELD2Q8N4S9 558 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ATP6V0D2Q8N8Y2 350 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PPP1R13LQ8WUF5 828 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CASP10Q92851 521 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RCN3Q96D15 328 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 L3HYPDHQ96EM0 354 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UBXN10Q96LJ8 280 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LRGUKQ96M69 825 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZCWPW1Q9H0M4 648 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TMLHEQ9NVH6 421 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UTRNP46939 3433 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DOCK4Q8N1I0 1966 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MROH6A6NGR9 719 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NEMP1O14524 444 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CA12O43570 354 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PMPCBO75439 489 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 EOMESO95936 686 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PEX11BO96011 259 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 EPOP01588 193 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SAT1P21673 171 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 IGFBP6P24592 240 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GLRBP48167 497 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ACADVLP49748 655 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 RABGGTBP53611 331 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ROR2Q01974 943 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ACVR1Q04771 509 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CRHR2Q13324 411 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CTBP1Q13363 440 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SEPT6Q14141 434 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SMAD1Q15797 465 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MARC1Q5VT66 337 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NXNQ6DKJ4 435 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FAM45BPQ6NSW5 357 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF598Q86UK7 904 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 LRRTM3Q86VH5 581 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MFSD6LQ8IWD5 586 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CCNYL1Q8N7R7 359 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TXNDC5Q8NBS9 432 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GPR150Q8NGU9 434 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FAM45AQ8TCE6 357 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PGLYRP2Q96PD5 576 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CDRT15Q96T59 188 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FTHL17Q9BXU8 183 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UNC93B1Q9H1C4 597 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 EBF3Q9H4W6 596 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TBC1D30Q9Y2I9 924 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 COPG1Q9Y678 874 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MOXD2PA6NHM9 499 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 BBIP1A8MTZ0 92 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GOLGA8TH3BQL2 631 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 WISP3O95389 354 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CTSHP09668 335 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 HLA-DPA1P20036 260 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PEX2P28328 305 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GMPRP36959 345 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 BRCC3P46736 316 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 MAPKAPK2P49137 400 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AFF1P51825 1210 aaKnown RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 KPNA1P52294 538 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CHN2P52757 468 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 YBEYP58557 167 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 IL10RBQ08334 325 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DLG1Q12959 904 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF683Q8IZ20 524 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 NUP93Q8N1F7 819 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SCAMP5Q8TAC9 235 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ASB9Q96DX5 294 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 DUS3LQ96G46 650 aaKnown RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 BTN2A3PQ96KV6 586 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ZNF599Q96NL3 588 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CYP2S1Q96SQ9 504 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 PAAF1Q9BRP4 392 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SLC25A23Q9BV35 468 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SHCBP1LQ9BZQ2 653 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AGO3Q9H9G7 860 aaKnown RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SP110Q9HB58 689 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 IL37Q9NZH6 218 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CACNG4Q9UBN1 327 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 THSD7BQ9C0I4 1608 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TCAF2A6NFQ2 919 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 A8MT66 165 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 POMCP01189 267 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 FGF1P05230 155 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 IMPDH1P20839 514 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CD52P31358 61 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AVPR1AP37288 418 aa10.07□□□□□ -0.8
TNFRSF11B-201ENST00000297350 THPOP40225 353 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms