RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CXorf51AA0A1B0GTR3 108 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 CCDC78A2IDD5 438 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 MROH6A6NGR9 719 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 NDUFAB1O14561 156 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SIN3BO75182 1162 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 NDST3O95803 873 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 PENKP01210 267 aaPredicted RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 ITGA2BP08514 1039 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 CSE1LP55060 971 aaKnown RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 IL9RQ01113 521 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 KCNC3Q14003 757 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SEPT6Q14141 434 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 RAB30Q15771 203 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SMAD1Q15797 465 aaKnown RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 TSTD2Q5T7W7 516 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 RETSATQ6NUM9 610 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 STRA8Q7Z7C7 330 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 GDAP1Q8TB36 358 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 MAGEC3Q8TD91 643 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SMG7Q92540 1137 aaKnown RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 EXOC2Q96KP1 924 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SLC40A1Q9NP59 571 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 IARS2Q9NSE4 1012 aaKnown RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 TBC1D14Q9P2M4 693 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SLC2A6Q9UGQ3 507 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 MRPS23Q9Y3D9 190 aaKnown RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 ARIH1Q9Y4X5 557 aaPredicted RBP15.68■□□□□ 0.1
LSM6-201ENST00000296581 ANKRD36A6QL64 1941 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 ALADP13716 330 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 PAMP19021 973 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 DRD4P21917 467 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 NRIP1P48552 1158 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 LIMK2P53671 638 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 SLC12A1Q13621 1099 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 CNGA3Q16281 694 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 PLEKHG6Q3KR16 790 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 RALGPS1Q5JS13 557 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 NLRP9Q7RTR0 991 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 ACMSDQ8TDX5 336 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 ISL2Q96A47 359 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 MAGEB18Q96M61 343 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 TDRD1Q9BXT4 1180 aaKnown RBP15.67■□□□□ 0.1
LSM6-201ENST00000296581 MSRAQ9UJ68 235 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 MYOFQ9NZM1 2061 aa15.67■□□□□ 0.1
LSM6-201ENST00000296581 VAPBO95292 243 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ALDOAP04075 364 aaKnown RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 WEE1P30291 646 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 CD70P32970 193 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 SPRP35270 261 aaPredicted RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 TAX1BP1Q86VP1 789 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 TMEM25Q86YD3 366 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ARID3BQ8IVW6 561 aaPredicted RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 GDPD5Q8WTR4 605 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ZNF473Q8WTR7 871 aaKnown RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 ABHD8Q96I13 439 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 GDF15Q99988 308 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 PIDD1Q9HB75 910 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 INTS6Q9UL03 887 aaKnown RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 C2orf16Q68DN1 1984 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 COPEO14579 308 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ETV4P43268 484 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 LAMB3Q13751 1172 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 LVRNQ6Q4G3 990 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 MICALCLQ6ZW33 695 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 VN1R2Q8NFZ6 395 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 ING5Q8WYH8 240 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 PEX13Q92968 403 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 OTUB2Q96DC9 234 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 SFXN1Q9H9B4 322 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 SLC17A7Q9P2U7 560 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 GRID1Q9ULK0 1009 aa15.66■□□□□ 0.1
LSM6-201ENST00000296581 FCF1Q9Y324 198 aaKnown RBP15.66■□□□□ 0.1
LSM6-201ENST00000296581 LDB2O43679 373 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 MT-CO1P00395 513 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 PRLP01236 227 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 DHRS4L1P0CG22 281 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 MAGEA12P43365 314 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 RHOAP61586 193 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 GALNT3Q14435 633 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 HHATQ5VTY9 493 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 RNF135Q8IUD6 432 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 LRRC34Q8IZ02 419 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 KIAA1958Q8N8K9 716 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 OR13J1Q8NGT2 312 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 IRF7Q92985 503 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 ATP2A3Q93084 1043 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 SRPK1Q96SB4 655 aaKnown RBP15.65■□□□□ 0.1
LSM6-201ENST00000296581 CDCA3Q99618 268 aaPredicted RBP15.65■□□□□ 0.1
LSM6-201ENST00000296581 ABCB8Q9NUT2 735 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 RIMKLBQ9ULI2 386 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 CHKBQ9Y259 395 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 PDE4DIPQ5VU43 2346 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 EPOPA6NHQ4 379 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 GOLGA8TH3BQL2 631 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 TIMM44O43615 452 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms