RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SUV39H2Q9H5I1 410 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 EBF2Q9HAK2 575 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PREBQ9HCU5 417 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 AASDHPPTQ9NRN7 309 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SLCO1B1Q9Y6L6 691 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CFAP54Q96N23 3096 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 A0A1W2PQU0 124 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CTAGE15A4D2H0 777 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 PJA2O43164 708 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 PIGNO95427 931 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CTAGE8P0CG41 777 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 XPAP23025 273 aaPredicted RBP12.22□□□□□ -0.45
HMGB2-201ENST00000296503 RGRP47804 291 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CSNK1DP48730 415 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 RACK1P63244 317 aaKnown RBP12.22□□□□□ -0.45
HMGB2-201ENST00000296503 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
HMGB2-201ENST00000296503 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CTAGE6Q86UF2 777 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CTAGE4Q8IX94 777 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 SERAC1Q96JX3 654 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 PSKH2Q96QS6 385 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 HEY1Q9Y5J3 304 aa12.22□□□□□ -0.45
HMGB2-201ENST00000296503 A0A1B0GVT2 93 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.45
HMGB2-201ENST00000296503 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.45
HMGB2-201ENST00000296503 APOL1O14791 398 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 SLC30A4O14863 429 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 SLC31A1O15431 190 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 PSTPIP1O43586 416 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 NEBLO76041 1014 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 ZFXP17010 805 aaPredicted RBP12.21□□□□□ -0.45
HMGB2-201ENST00000296503 MX2P20592 715 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 GARSP41250 739 aaKnown RBP12.21□□□□□ -0.45
HMGB2-201ENST00000296503 LIMK1P53667 647 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 GBE1Q04446 702 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 BCL2L1Q07817 233 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 ITKQ08881 620 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 PUM1Q14671 1186 aaKnown RBP eCLIP12.21□□□□□ -0.451e-41■■■□□ 17.2
HMGB2-201ENST00000296503 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
HMGB2-201ENST00000296503 C11orf63Q6NUN7 778 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 MFSD7Q6UXD7 560 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 RAB7BQ96AH8 199 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 SKA1Q96BD8 255 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 SLC6A18Q96N87 628 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 RTKNQ9BST9 563 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 FADS3Q9Y5Q0 445 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 ADAMTS9Q9P2N4 1935 aa12.21□□□□□ -0.45
HMGB2-201ENST00000296503 MACROD2A1Z1Q3 448 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 TTC24A2A3L6 582 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 ZNF487B1APH4 448 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 MUSKO15146 869 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 LATO43561 262 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 PEX11BO96011 259 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 TIMP2P16035 220 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 CCNCP24863 283 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 SERPINA4P29622 427 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 NUDT1P36639 197 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 MMP13P45452 471 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 C21orf59P57076 290 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 DYNLT1P63172 113 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 GALNT2Q10471 571 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 GRIK2Q13002 908 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 STAT4Q14765 748 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 LLGL1Q15334 1064 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 KAZNQ674X7 775 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 TIGD7Q6NT04 549 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 HORMAD1Q86X24 394 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 VSIG1Q86XK7 387 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 CCDC50Q8IVM0 306 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 RCOR2Q8IZ40 523 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 ZNF641Q96N77 438 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 NAPGQ99747 312 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-201ENST00000296503 ORAI3Q9BRQ5 295 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 ZDHHC5Q9C0B5 715 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 NT5MQ9NPB1 228 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
HMGB2-201ENST00000296503 SPTBN4Q9H254 2564 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 SHROOM3Q8TF72 1996 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 MATN3O15232 486 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 TSPAN6O43657 245 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 AP1G1O43747 822 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 OPHN1O60890 802 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 CD38P28907 300 aa12.2□□□□□ -0.46
HMGB2-201ENST00000296503 ABL2P42684 1182 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms