RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 TRIP4Q15650 581 aaPredicted RBP13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ACSBG2Q5FVE4 666 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ARL14EPQ8N8R7 260 aaPredicted RBP13.3□□□□□ -0.28
RUBCN-202ENST00000296343 LPCAT1Q8NF37 534 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 CATSPER2Q96P56 530 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 TSGA13Q96PP4 275 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 WASF2Q9Y6W5 498 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 MYO16Q9Y6X6 1858 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 CSF2RAP15509 400 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ITGB8P26012 769 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 PMLP29590 882 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 CD151P48509 253 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 RAB10P61026 200 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 CUL3Q13618 768 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 STXBP5Q5T5C0 1151 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ISLR2Q6UXK2 745 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 SLC25A51Q9H1U9 297 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 UTP6Q9NYH9 597 aaKnown RBP13.3□□□□□ -0.28
RUBCN-202ENST00000296343 MAGEB16A2A368 324 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ZBTB14O43829 449 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TGDSO95455 350 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 MBL2P11226 248 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 CTPS1P17812 591 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 CALB2P22676 271 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ADRA1AP35348 466 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 KCNC1P48547 511 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 CDKN2DP55273 166 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 CYP4F8P98187 520 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 CLEC6AQ6EIG7 209 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 IMP4Q96G21 291 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TMEM169Q96HH4 297 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 RPL10LQ96L21 214 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 GPR22Q99680 433 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 POMKQ9H5K3 350 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 GIMAP2Q9UG22 337 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 FCF1Q9Y324 198 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 PTGDR2Q9Y5Y4 395 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 NYNRINQ9P2P1 1898 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 OR6C75A6NL08 312 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SPECC1L-ADORA2AF8WAN1 911 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 BIRC5O15392 142 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 RPLP2P05387 115 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SH2D4BQ5SQS7 431 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 LRRC8EQ6NSJ5 796 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 UMODL1-AS1Q8N2C9 162 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TNFRSF12AQ9NP84 129 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TMEM39AQ9NV64 488 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 DNMT3LQ9UJW3 386 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ZNF840PA6NDX5 716 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 IQCF5A8MTL0 148 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 H0Y626 953 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 KLF11O14901 512 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 PEX11AO75192 247 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 C1RP00736 705 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ITGB6P18564 788 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 MZF1P28698 734 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ZXDBP98169 803 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SERINC3Q13530 473 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 MRPL58Q14197 206 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 SEMA3AQ14563 771 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 USP41Q3LFD5 358 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 RNF219Q5W0B1 726 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TXNDC5Q8NBS9 432 aaKnown RBP13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 ACMSDQ8TDX5 336 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 TMEM248Q9NWD8 314 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 RAD54BQ9Y620 910 aa13.29□□□□□ -0.28
RUBCN-202ENST00000296343 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CCL5P13501 91 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 PAMP19021 973 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 FMO4P31512 558 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CSE1LP55060 971 aaKnown RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 GNA12Q03113 381 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 TSTD2Q5T7W7 516 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 C1orf146Q5VVC0 180 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms