RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RAET1EQ8TD07 263 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 EXT2Q93063 718 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 C1orf74Q96LT6 269 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SSX2IPQ9Y2D8 614 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 LRRC14BA6NHZ5 514 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 NVLO15381 856 aaKnown RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 PSMD3O43242 534 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 CCDC166P0CW27 439 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 RPL14P50914 215 aaKnown RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 CCL23P55773 120 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 DBN1Q16643 649 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 FUT10Q6P4F1 479 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 SH3TC2Q8TF17 1288 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 DNAJC1Q96KC8 554 aaKnown RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 TRIM62Q9BVG3 475 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 ATP13A1Q9HD20 1204 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 FNDC3AQ9Y2H6 1198 aaKnown RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 PLXNA3P51805 1871 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 PPP6CO00743 305 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 RAMP2O60895 175 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 KLHL2O95198 593 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 RENBPP51606 427 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 ACTR3P61158 418 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 CCNIQ14094 377 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 PPP1R3AQ16821 1122 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 KIAA0930Q6ICG6 404 aaPredicted RBP11.86□□□□□ -0.51
RHO-201ENST00000296271 SNX32Q86XE0 403 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
RHO-201ENST00000296271 BTN2A3PQ96KV6 586 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 TMEM161AQ9NX61 479 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 RAP2CQ9Y3L5 183 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
RHO-201ENST00000296271 IGLV3-10A0A075B6K4 115 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 WASH4PA8MWX3 477 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TMEM189-UBE2V1I3L0A0 370 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 LDB2O43679 373 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TSPAN3O60637 253 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 CABYRO75952 493 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ALDH2P05091 517 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ANPEPP15144 967 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 PIK3R1P27986 724 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 SEL1L3Q68CR1 1132 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 MYLK4Q86YV6 388 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 RYBPQ8N488 228 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 KDM1BQ8NB78 822 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 SLC45A3Q96JT2 553 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 GTSE1Q9NYZ3 720 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 IL37Q9NZH6 218 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 STX18Q9P2W9 335 aaKnown RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 CDH22Q9UJ99 828 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 PCDHB7Q9Y5E2 793 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 PRRC2BQ5JSZ5 2229 aaKnown RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 TBKBP1A7MCY6 615 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 HDAC3O15379 428 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 MAP3K13O43283 966 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 IRF1P10914 325 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 VHLP40337 213 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 NDST2P52849 883 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 PKNOX1P55347 436 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
RHO-201ENST00000296271 SERINC3Q13530 473 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 HECTD2Q5U5R9 776 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ZNF549Q6P9A3 640 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 NET1Q7Z628 596 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 CILP2Q8IUL8 1156 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ATP6V0D2Q8N8Y2 350 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 USP13Q92995 863 aaPredicted RBP11.85□□□□□ -0.51
RHO-201ENST00000296271 BHMTQ93088 406 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 TSNARE1Q96NA8 513 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ALG9Q9H6U8 611 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 GPAMQ9HCL2 828 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 VPS45Q9NRW7 570 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 PTGDR2Q9Y5Y4 395 aa11.85□□□□□ -0.51
RHO-201ENST00000296271 ATP6AP2A0A1C7CYW4 349 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 FAM92AA1XBS5 289 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 GPR39O43194 453 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 ATP6AP2O75787 350 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 CIB2O75838 187 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 S1PR4O95977 384 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 KLKB1P03952 638 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 GALTP07902 379 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 TACR2P21452 398 aa11.84□□□□□ -0.51
RHO-201ENST00000296271 FGFR3P22607 806 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms