RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SLC38A7Q9NVC3 462 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ZDHHC2Q9UIJ5 367 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PTBP2Q9UKA9 531 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 SOBPA7XYQ1 873 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 PSMD12O00232 456 aaPredicted RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 BAIAP3O94812 1187 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 GJA8P48165 433 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 ATP4BP51164 291 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 C21orf59P57076 290 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 TPI1P60174 286 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 CCNA1P78396 465 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 PTK2BQ14289 1009 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 DLG2Q15700 870 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 BSPRYQ5W0U4 402 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 PM20D1Q6GTS8 502 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 C8orf82Q6P1X6 216 aaPredicted RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 FASTKD5Q7L8L6 764 aaKnown RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 ADAMTS16Q8TE57 1224 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 EIF2AQ9BY44 585 aaKnown RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 TASP1Q9H6P5 420 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 CAB39LQ9H9S4 337 aa10.46□□□□□ -0.73
SKA1-201ENST00000285116 PIH1D1Q9NWS0 290 aaKnown RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 IPO11Q9UI26 975 aaKnown RBP10.46□□□□□ -0.73
SKA1-201ENST00000285116 HCRTO43612 131 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 TFPTP0C1Z6 253 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 CD1EP15812 388 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 ZNF24P17028 368 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 DPP6P42658 865 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 DAOAP59103 153 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 RAB10P61026 200 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 PITX1P78337 314 aaPredicted RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 ZBTB17Q13105 803 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 PCID2Q5JVF3 399 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 CERCAMQ5T4B2 595 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 PKN3Q6P5Z2 889 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 CLEC20AQ6ZU45 233 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 BEND5Q7L4P6 421 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 OSTM1Q86WC4 334 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 NPWQ8N729 165 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 ATP6V1E2Q96A05 226 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 CCDC126Q96EE4 140 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 PLEKHA8Q96JA3 519 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 MRPL57Q9BQC6 102 aaKnown RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 CEP41Q9BYV8 373 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 WDR55Q9H6Y2 383 aaPredicted RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 RMI1Q9H9A7 625 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 PALMDQ9NP74 551 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 IARS2Q9NSE4 1012 aaKnown RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 WDR70Q9NW82 654 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 ACOT9Q9Y305 439 aa10.46□□□□□ -0.74
SKA1-201ENST00000285116 AAR2Q9Y312 384 aaKnown RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 COPG1Q9Y678 874 aaKnown RBP10.46□□□□□ -0.74
SKA1-201ENST00000285116 SHROOM3Q8TF72 1996 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SMIM35A0A1B0GVV1 85 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 MBLAC1A4D2B0 266 aaPredicted RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 TK2O00142 265 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 KCNK1O00180 336 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SDHDO14521 159 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TRIM24O15164 1050 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 DLX3O60479 287 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 HUS1O60921 280 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 NELFEP18615 380 aaKnown RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 NFKB1P19838 968 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CYP2C18P33260 490 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 GMPRP36959 345 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 CXCR3P49682 368 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ATXN3P54252 364 aaPredicted RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 SLC14A2Q15849 920 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ARL13BQ3SXY8 428 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TSTD2Q5T7W7 516 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SYPL2Q5VXT5 272 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 MYO1HQ8N1T3 1032 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FSTL5Q8N475 847 aaPredicted RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 TERB1Q8NA31 727 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM149B1Q96BN6 582 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 DCUN1D5Q9BTE7 237 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 MEAF6Q9HAF1 191 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SLC39A10Q9ULF5 831 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TCRBV3S1A0A5B6 114 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 F5H423 210 aaPredicted RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM72CH0Y354 149 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 HTRA2O43464 458 aaPredicted RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 VAPBO95292 243 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ZNF286BP0CG31 522 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 NMBRP28336 390 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 TTKP33981 857 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 ARCN1P48444 511 aaKnown RBP10.45□□□□□ -0.74
SKA1-201ENST00000285116 CDH15P55291 814 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 STX5Q13190 355 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 SQLEQ14534 574 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM72AQ5TYM5 149 aa10.45□□□□□ -0.74
SKA1-201ENST00000285116 FAM72DQ6L9T8 149 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms