RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 WDR5P61964 334 aaKnown RBP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 DSG1Q02413 1049 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 UGP2Q16851 508 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 CTC1Q2NKJ3 1217 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 CCDC153Q494R4 210 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 CENPLQ8N0S6 344 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 EFHBQ8N7U6 833 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 MAB21L3Q8N8X9 362 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 PDZD8Q8NEN9 1154 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 WWP1Q9H0M0 922 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 SMG9Q9H0W8 520 aaKnown RBP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 VPS45Q9NRW7 570 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 MRPL17Q9NRX2 175 aaKnown RBP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 MYO9BQ13459 2157 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GOLGA8QA0A0J9YX86 632 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GOLGA8OA6NCC3 632 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GOLGA8NF8WBI6 632 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 G3V2L1 256 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 ATXN1LP0C7T5 689 aaKnown RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 RAB10P61026 200 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 ABCE1P61221 599 aaKnown RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 ZXDBP98169 803 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 DLG1Q12959 904 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 FAM219BQ5XKK7 198 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 RPS27LQ71UM5 84 aaKnown RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 RYBPQ8N488 228 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 EXT2Q93063 718 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 SORT1Q99523 831 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 OLFM1Q99784 485 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 KCNK4Q9NYG8 393 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 L3MBTL1Q9Y468 752 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GOLGA8CPA6NN73 597 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 ATP6V1G2O95670 118 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 CKMP06732 381 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 PDHA1P08559 390 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 HDCP19113 662 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 MZF1P28698 734 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 SLC12A1Q13621 1099 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 INSCQ1MX18 579 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 CFAP157Q5JU67 520 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 ADGRF1Q5T601 910 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 KIAA0930Q6ICG6 404 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 TPGS1Q6ZTW0 290 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 TREML1Q86YW5 311 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 TEX26Q8N6G2 289 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 SH3RF2Q8TEC5 729 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GATA5Q9BWX5 397 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 INSL5Q9Y5Q6 135 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 NCF2P19878 526 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-201ENST00000279247 MAGEA12P43365 314 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 EPHB3P54753 998 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 CDH4P55283 916 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 PIM3Q86V86 326 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 KLHDC8BQ8IXV7 354 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 NSMCE4AQ9NXX6 385 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 CPQQ9Y646 472 aa18.07■□□□□ 0.48
CAPN1-201ENST00000279247 GABRR2P28476 465 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 CLEC14AQ86T13 490 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 RNF168Q8IYW5 571 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-201ENST00000279247 HS6ST3Q8IZP7 471 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 POU5F2Q8N7G0 328 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 C2CD4AQ8NCU7 369 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-201ENST00000279247 LPCAT1Q8NF37 534 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 PPP1R2P1Q96PQ5 205 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 CDK5RAP1Q96SZ6 601 aaKnown RBP18.06■□□□□ 0.48
CAPN1-201ENST00000279247 ZBED2Q9BTP6 218 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 PRKD2Q9BZL6 878 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 TM6SF2Q9BZW4 377 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 VPS28Q9UK41 221 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 PRR5-ARHGAP8B1AHC4 643 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 H3BNC9 293 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 BNIP3LO60238 219 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 TRIM13O60858 407 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 BMP1P13497 986 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 SP100P23497 879 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-201ENST00000279247 SLC8A1P32418 973 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 ARHGAP8P85298 464 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 BBS5Q8N3I7 341 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 FBXO27Q8NI29 283 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 TANC1Q9C0D5 1861 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 BPIFA1Q9NP55 256 aa18.06■□□□□ 0.48
CAPN1-201ENST00000279247 CXXC1Q9P0U4 656 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-201ENST00000279247 MGRN1O60291 552 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
CAPN1-201ENST00000279247 TIMP1P01033 207 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MPSTP25325 297 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 GRIA4P48058 902 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 TMC7Q7Z402 723 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MAVSQ7Z434 540 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 TMEM150AQ86TG1 271 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 HEXDCQ8WVB3 486 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 NSL1Q96IY1 281 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MIPEPQ99797 713 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 FAM167BQ9BTA0 163 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MCMBPQ9BTE3 642 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MAGEH1Q9H213 219 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 PDFQ9HBH1 243 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms