RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 E7ENQ6 273 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ACSL4O60488 711 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 VNN1O95497 513 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 COX7A2P14406 83 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 KRT20P35900 424 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 CDH13P55290 713 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 SKP1P63208 163 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 IRX1P78414 480 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 UBE3AQ05086 875 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 TIGD5Q53EQ6 642 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 LYPLAL1Q5VWZ2 237 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 OR4K2Q8NGD2 314 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 NLNQ9BYT8 704 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 MMADHCQ9H3L0 296 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 RPS6KB2Q9UBS0 482 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 COL1A1P02452 1464 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 URB1O60287 2271 aaKnown RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ATP6AP2A0A1C7CYW4 349 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 PRMT5O14744 637 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 PMM2O15305 246 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 MAGEC1O60732 1142 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ATP6AP2O75787 350 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 NDST3O95803 873 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 NTRK1P04629 796 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ELFN1P0C7U0 828 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 HTR7P34969 479 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 HPCAL1P37235 193 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 RPS7P62081 194 aaKnown RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 FOXR1Q6PIV2 292 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 SCIMPQ6UWF3 145 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 STK32CQ86UX6 486 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 OR8D1Q8WZ84 308 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 MYO19Q96H55 970 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 KRCC1Q9NPI7 259 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ZNHIT2Q9UHR6 403 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ADGRA3Q8IWK6 1321 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ZBTB22O15209 634 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 GUCY1B2O75343 617 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 UGT2B4P06133 528 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 UNGP13051 313 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-201ENST00000277575 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.599e-9■■■□□ 15.7
USP6NL-201ENST00000277575 SLC34A1Q06495 639 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 TRIM60Q495X7 471 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 RHBDF2Q6PJF5 856 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 LINGO1Q96FE5 620 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 SLC9A7Q96T83 725 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 CAB39LQ9H9S4 337 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 PSME2Q9UL46 239 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 INVSQ9Y283 1065 aa11.34□□□□□ -0.59
USP6NL-201ENST00000277575 A0A088AWK7 358 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 A0A1B0GVM2 712 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 TCAF2A6NFQ2 919 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 BIRC5O15392 142 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF10P21506 573 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CXCR2P25025 360 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GPD2P43304 727 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GABRB2P47870 512 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 NUP107P57740 925 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ABRQ12979 859 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CPSF6Q16630 551 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 FAM187BQ17R55 369 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF398Q8TD17 642 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 UTP15Q8TED0 518 aaKnown RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CHRAC1Q9NRG0 131 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 TMCO1Q9UM00 188 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 UNCXA6NJT0 531 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SRRM3A6NNA2 597 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 KCNU1A8MYU2 1149 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 FAM220BPB1ANY3 271 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 HGFP14210 728 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CCNCP24863 283 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 HTR1BP28222 390 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ASPAP45381 313 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 NAA20P61599 178 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GNA12Q03113 381 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZFP1Q6P2D0 407 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 OR6Y1Q8NGX8 325 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZSCAN18Q8TBC5 510 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 RDH11Q8TC12 318 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SLC44A1Q8WWI5 657 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 SCLYQ96I15 445 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 QKIQ96PU8 341 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP6NL-201ENST00000277575 MYOCQ99972 504 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ROGDIQ9GZN7 287 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
USP6NL-201ENST00000277575 ZFP14Q9HCL3 533 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms