RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TMEM151AQ8N4L1 468 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 PEX13Q92968 403 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 CLP1Q92989 425 aaKnown RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 KLHL29Q96CT2 875 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 MUC3BQ9H195 1237 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 SAR1AQ9NR31 198 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 FBXO6Q9NRD1 293 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-201ENST00000276573 TXLNGQ9NUQ3 528 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 RIMKLBQ9ULI2 386 aa9.66□□□□□ -0.86
TRIM55-201ENST00000276573 MIA3Q5JRA6 1907 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 C2orf71A6NGG8 1288 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 H0Y626 953 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 AURKAO14965 403 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 LYPLA1O75608 230 aaPredicted RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ZMPSTE24O75844 475 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 CD160O95971 181 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 C1RP00736 705 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 KITP10721 976 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 STMN1P16949 149 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 SERPINB3P29508 390 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 AVPR1AP37288 418 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 PGGT1BP53609 377 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TAS2R39P59534 338 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ABCE1P61221 599 aaKnown RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ARF5P84085 180 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ZBTB16Q05516 673 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ITGA9Q13797 1035 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 GALNT3Q14435 633 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 FSCBQ5H9T9 825 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ATG14Q6ZNE5 492 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 CCDC149Q6ZUS6 474 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 PTAR1Q7Z6K3 402 aaPredicted RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 CLNKQ7Z7G1 428 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TMC8Q8IU68 726 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 LMNTD2Q8IXW0 634 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 MRPS31Q92665 395 aaKnown RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 SKA1Q96BD8 255 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ELMO2Q96JJ3 720 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TBATAQ96M53 351 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TSNARE1Q96NA8 513 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 OMDQ99983 421 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TASP1Q9H6P5 420 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ARHGEF3Q9NR81 526 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 MID2Q9UJV3 735 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 TRIM33Q9UPN9 1127 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
TRIM55-201ENST00000276573 INSL6Q9Y581 213 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 OR51B4Q9Y5P0 310 aa9.65□□□□□ -0.86
TRIM55-201ENST00000276573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SCAMP3O14828 347 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SNAP91O60641 907 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TRIM13O60858 407 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KLHL2O95198 593 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 LUC7L3O95232 432 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 S1PR4O95977 384 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PRLP01236 227 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 LRG1P02750 347 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SBK3P0C264 359 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 HSPA8P11142 646 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CLCN5P51795 746 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 AQP5P55064 265 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PRAMEP78395 509 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SLC7A9P82251 487 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CYP4F8P98187 520 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CTC1Q2NKJ3 1217 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TTC31Q49AM3 519 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 RBM20Q5T481 1227 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PACS2Q86VP3 889 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CILP2Q8IUL8 1156 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CENPLQ8N0S6 344 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 MAB21L3Q8N8X9 362 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 HJURPQ8NCD3 748 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KREMEN2Q8NCW0 462 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 RDH11Q8TC12 318 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 PIWIL2Q8TC59 973 aaKnown RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 BLOC1S5Q8TDH9 187 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 STYXQ8WUJ0 223 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 KCTD4Q8WVF5 259 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 NXNL1Q96CM4 212 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 ALG14Q96F25 216 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 GPR78Q96P69 363 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 NUDCD1Q96RS6 583 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 SORT1Q99523 831 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 FEM1AQ9BSK4 669 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 TUBB6Q9BUF5 446 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 OXSMQ9NWU1 459 aa9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-201ENST00000276573 CPSF2Q9P2I0 782 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms