RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ZNF26P17031 533 aaPredicted RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 NDST2P52849 883 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 FOXA1P55317 472 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 NAB1Q13506 487 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 ARL13BQ3SXY8 428 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 NUP93Q8N1F7 819 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 TSPAN14Q8NG11 270 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 FAM81AQ8TBF8 368 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 MRPL46Q9H2W6 279 aaKnown RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 TMLHEQ9NVH6 421 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 A0A0U1RQS6 177 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 A0A1B0GTL3 188 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 PRSS51A0A1B0GVH4 220 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 NCF1BA6NI72 391 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 NCF1CA8MVU1 366 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 ZNF487B1APH4 448 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 TARM1B6A8C7 271 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 DENRO43583 198 aaKnown RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 NCF1P14598 390 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 SCNN1GP51170 649 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ZNF410Q86VK4 478 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 SLC2A13Q96QE2 648 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 TSPYL2Q9H2G4 693 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 USP22Q9UPT9 525 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ARHGAP10A1A4S6 786 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 A8MT66 165 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 MRASO14807 208 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 NCK1P16333 377 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 LRPAP1P30533 357 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 GALNT2Q10471 571 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 KYAT1Q16773 422 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 HMBOX1Q6NT76 420 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 NEPROQ6NW34 567 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 C14orf80Q86SX3 495 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 GPC2Q8N158 579 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ZNF786Q8N393 782 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 HBEGFQ99075 208 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 NT5MQ9NPB1 228 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 RCOR3Q9P2K3 495 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 MTHFD1P11586 935 aaKnown RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 NPY2RP49146 381 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ARSDP51689 593 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 SEMA3BQ13214 749 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 DBN1Q16643 649 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 CIR1Q86X95 450 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 DDIASQ8IXT1 998 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 ISL2Q96A47 359 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 SMIM14Q96QK8 99 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 CYP2S1Q96SQ9 504 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 PRDM16Q9HAZ2 1276 aa16.92■□□□□ 0.3
SQLE-201ENST00000265896 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
SQLE-201ENST00000265896 PDHXO00330 501 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 HMBSP08397 361 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 CDK4P11802 303 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 PRDX6P30041 224 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 RGS2P41220 211 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 CSE1LP55060 971 aaKnown RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 IKBKEQ14164 716 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 TRIM25Q14258 630 aaKnown RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 ZBTB49Q6ZSB9 765 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 DQX1Q8TE96 717 aaKnown RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 HDAC11Q96DB2 347 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 CNDP1Q96KN2 507 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 MARCH4Q9P2E8 410 aaPredicted RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 TRIM38O00635 465 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 ARCN1P48444 511 aaKnown RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 CD151P48509 253 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 CBLBQ13191 982 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 PCID2Q5JVF3 399 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 RETREG3Q86VR2 466 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 PPHLN1Q8NEY8 458 aaKnown RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 RIN3Q8TB24 985 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 MYLPFQ96A32 169 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 ZNF385DQ9H6B1 395 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 GDAP2Q9NXN4 497 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.91■□□□□ 0.3
SQLE-201ENST00000265896 ACTL7AQ9Y615 435 aa16.91■□□□□ 0.3
SQLE-201ENST00000265896 J3KR12 359 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 B3GAT3O94766 335 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 ATP6V1B2P21281 511 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 TICAM1Q8IUC6 712 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 KIFC1Q9BW19 673 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 LMCD1Q9NZU5 365 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 CNOT6Q9ULM6 557 aaKnown RBP16.9■□□□□ 0.3
SQLE-201ENST00000265896 H3BMM5 538 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 PAGE1O75459 146 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 TOMM70O94826 608 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 CD86P42081 329 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 CDKN2DP55273 166 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 GRB7Q14451 532 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
SQLE-201ENST00000265896 CBR4Q8N4T8 237 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms