RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SEMA4BQ9NPR2 832 aaPredicted RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 AP4S1Q9Y587 144 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 SERPINH1P50454 418 aaKnown RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 ARHGAP17Q68EM7 881 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 HDAC10Q969S8 669 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 PCDHB12Q9Y5F1 795 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 NUMBLQ9Y6R0 609 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 LIN7AO14910 233 aaPredicted RBP19.98■□□□□ 0.79
CSPG5-201ENST00000264723 ATP5C1P36542 298 aaKnown RBP19.98■□□□□ 0.79
CSPG5-201ENST00000264723 FAM187BQ17R55 369 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SPNS2Q8IVW8 549 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 DNAJB14Q8TBM8 379 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SIKE1Q9BRV8 207 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 BRD8Q9H0E9 1235 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 PLK2Q9NYY3 685 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 UXTQ9UBK9 157 aaPredicted RBP19.98■□□□□ 0.79
CSPG5-201ENST00000264723 FAM149AA5PLN7 773 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 ZNF23P17027 643 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 INPP5AQ14642 412 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 MTX3Q5HYI7 312 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 NR1H4Q96RI1 486 aaPredicted RBP19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SLC39A3Q9BRY0 314 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 TRIM15Q9C019 465 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 ENTPD7Q9NQZ7 604 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SLC2A6Q9UGQ3 507 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 TCRBV5S1A1TA0A578 114 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SEPT4O43236 478 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 HDCP19113 662 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SZRD1Q7Z422 152 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 SHKBP1Q8TBC3 707 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 DEFB118Q96PH6 123 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 RHOJQ9H4E5 214 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 BPIFA1Q9NP55 256 aa19.98■□□□□ 0.79
CSPG5-201ENST00000264723 GNEQ9Y223 722 aaKnown RBP19.98■□□□□ 0.79
CSPG5-201ENST00000264723 IGKV6-21A0A0C4DH24 114 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 CABYRO75952 493 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 GUCA1CO95843 209 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DDX39BQ13838 428 aaKnown RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 INTS6LQ5JSJ4 861 aaKnown RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DNAJC14Q6Y2X3 702 aaPredicted RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DBF4BQ8NFT6 615 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 TRPC4APQ8TEL6 797 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 TRIM54Q9BYV2 358 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 SLCO1B7G3V0H7 640 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 TRAFD1O14545 582 aaPredicted RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 TIPRLO75663 272 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 FMO4P31512 558 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 SLC7A2P52569 658 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 INCA1Q0VD86 236 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 NFYCQ13952 458 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 KBTBD2Q8IY47 623 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 B4GALNT2Q8NHY0 566 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 ZDHHC2Q9UIJ5 367 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DLEC1Q9Y238 1755 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 KLF11O14901 512 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 HOXA2O43364 376 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 KATNA1O75449 491 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 GSTA3Q16772 222 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DHFR2Q86XF0 187 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 DNAJA2O60884 412 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 H2AFYO75367 372 aaKnown RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 PFKMP08237 780 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 ZBTB17Q13105 803 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 GALNT3Q14435 633 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 ARMC3Q5W041 872 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 AAGABQ6PD74 315 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 SLC24A5Q71RS6 500 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 MON1AQ86VX9 555 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 MFN1Q8IWA4 741 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 OR6K2Q8NGY2 324 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 PHF12Q96QT6 1004 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 ZYG11BQ9C0D3 744 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 NOL11Q9H8H0 719 aaKnown RBP19.97■□□□□ 0.79
CSPG5-201ENST00000264723 TMEM39AQ9NV64 488 aa19.97■□□□□ 0.79
CSPG5-201ENST00000264723 SCN9AQ15858 1988 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 PARNO95453 639 aaKnown RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 NOGQ13253 232 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 ARHGEF7Q14155 803 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 IFNL1Q8IU54 200 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CRYBG2Q8N1P7 616 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 TRAPPC9Q96Q05 1148 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 DRC3Q9H069 523 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CASS4Q9NQ75 786 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 PSMD13Q9UNM6 376 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 MYH9P35579 1960 aaKnown RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 OR51F1A6NGY5 319 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 OR6B1O95007 311 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 KCNK10P57789 538 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 ARHGAP36Q6ZRI8 547 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 UBR7Q8N806 425 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 RP9Q8TA86 221 aaKnown RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 SNX19Q92543 992 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 HBEGFQ99075 208 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CCDC106Q9BWC9 280 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CIPCQ9C0C6 399 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 A0A088AWK7 358 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 RNASEH1O60930 286 aaKnown RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 VPS26AO75436 327 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms