RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TEKT5Q96M29 485 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 SMIM14Q96QK8 99 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 C6orf106Q9H6K1 298 aaPredicted RBP18.51■□□□□ 0.55
SDF4-201ENST00000263741 BCLAF3A2AJT9 711 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 PGRMC1O00264 195 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 SPINT1O43278 529 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 SEMA4FO95754 770 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 MT-CYBP00156 380 aaPredicted RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 NEK3P51956 506 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 BYSLQ13895 437 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 PTPRRQ15256 657 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 TERF2Q15554 542 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 OASLQ15646 514 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 PAPD7Q5XG87 772 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 FBXL19Q6PCT2 694 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PRELID2Q8N945 189 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 TUBGCP5Q96RT8 1024 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 DUSP15Q9H1R2 295 aaPredicted RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 KCNH6Q9H252 994 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 GLOD4Q9HC38 313 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 FZD4Q9ULV1 537 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 TRAFD1O14545 582 aaPredicted RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 MTSS1O43312 755 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 NDUFS2O75306 463 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PTGER3P43115 390 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PPP2CBP62714 309 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PPP2CAP67775 309 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 SKOR1P84550 965 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PCSK7Q16549 785 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PLK5Q496M5 336 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 TEX35Q5T0J7 233 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PID1Q7Z2X4 250 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 KDELC2Q7Z4H8 507 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PRPF39Q86UA1 669 aaKnown RBP18.5■□□□□ 0.55
SDF4-201ENST00000263741 SLC41A1Q8IVJ1 513 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 AMACRQ9UHK6 382 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PCDHB9Q9Y5E1 797 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 RAI2Q9Y5P3 530 aa18.5■□□□□ 0.55
SDF4-201ENST00000263741 PDHA1P08559 390 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
SDF4-201ENST00000263741 MAPK8P45983 427 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 KCNJ1P48048 391 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 OTOGLQ3ZCN5 2332 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 CEP112Q8N8E3 955 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 FAM131CQ96AQ9 280 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 IMP4Q96G21 291 aaKnown RBP18.49■□□□□ 0.55
SDF4-201ENST00000263741 HSPA12BQ96MM6 686 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 ATXN2Q99700 1313 aaKnown RBP18.49■□□□□ 0.55
SDF4-201ENST00000263741 HDAC8Q9BY41 377 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 RSPH14Q9UHP6 348 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 ZNF148Q9UQR1 794 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 SAR1BQ9Y6B6 198 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 ADAMTS9Q9P2N4 1935 aa18.49■□□□□ 0.55
SDF4-201ENST00000263741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 PLRG1O43660 514 aaKnown RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 ETS1P14921 441 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 TIMP2P16035 220 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 OXTRP30559 389 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 CNR2P34972 360 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 ANKRD20A2Q5SQ80 823 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 ANKRD20A1Q5TYW2 823 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 ANKRD20A3Q5VUR7 823 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 PMS2CLQ68D20 193 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 TTC7BQ86TV6 843 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 GLIS1Q8NBF1 620 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 SNX19Q92543 992 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 NKD2Q969F2 451 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 ZNF641Q96N77 438 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 GORASP1Q9BQQ3 440 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 SMG5Q9UPR3 1016 aaKnown RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 CHKBQ9Y259 395 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 ZFHX2Q9C0A1 2572 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 A8MX80 341 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 PMPCBO75439 489 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 SERPINF2P08697 491 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 PSMB4P28070 264 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 DHPSP49366 369 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 NHLH1Q02575 133 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 GRM3Q14832 879 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 FAXCQ5TGI0 409 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 OXNAD1Q96HP4 312 aaPredicted RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 SPATA13Q96N96 652 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 TDRD1Q9BXT4 1180 aaKnown RBP18.48■□□□□ 0.55
SDF4-201ENST00000263741 SLC25A51Q9H1U9 297 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 EPC1Q9H2F5 836 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 SGK2Q9HBY8 427 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 HAUS2Q9NVX0 235 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 SLCO1B1Q9Y6L6 691 aa18.48■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3DA0A087WVF3 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3IA0A087WXS9 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3EA0A087X179 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3KA0A087X1G2 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 A0A0U1RQS6 177 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TSPAN11A1L157 253 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3FA6NER0 549 aaPredicted RBP18.47■□□□□ 0.55
SDF4-201ENST00000263741 UPK3BL1B0FP48 263 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3LB9A6J9 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 UPK3BL2E5RIL1 263 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 HTRA2O43464 458 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms